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Article

Abotsi, RE; Nicol, MP; McHugh, G; Simms, V; Rehman, AM; Barthus, C; Ngwira, LG; ... Dube, FS; + view all (2022) The impact of long-term azithromycin on antibiotic resistance in HIV-associated chronic lung disease. ERJ Open Research , 8 (1) , Article 00491-2021. 10.1183/23120541.00491-2021. Green open access
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Agyeman, Akosua A; You, Tao; Chan, Phylinda LS; Lonsdale, Dagan O; Hadjichrysanthou, Christoforos; Mahungu, Tabitha; Wey, Emmanuel Q; ... Standing, Joseph F; + view all (2022) Comparative assessment of viral dynamic models for SARS-CoV-2 for pharmacodynamic assessment in early treatment trials. British Journal of Clinical Pharmacology 10.1111/bcp.15518. (In press).

Albert, Michael H; Sirait, Tiarlan; Eikema, Dirk-Jan; Bakunina, Katerina; Wehr, Claudia; Suarez, Felipe; Fox, María Laura; ... Morris, Emma C; + view all (2022) Hematopoietic stem cell transplantation for adolescents and adults with inborn errors of immunity, an EBMT IEWP study. Blood 10.1182/blood.2022015506. (In press).

Alrubayyi, A; Moreno-Cubero, E; Hameiri-Bowen, D; Matthews, R; Rowland-Jones, S; Schurich, A; Peppa, D; (2022) Functional Restoration of Exhausted CD8 T Cells in Chronic HIV-1 Infection by Targeting Mitochondrial Dysfunction. Frontiers in Immunology , 13 , Article 908697. 10.3389/fimmu.2022.908697. Green open access
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Alrubayyi, Aljawharah; Rowland-Jones, Sarah; Peppa, Dimitra; (2022) Natural killer cells during acute HIV-1 infection: clues for HIV-1 prevention and therapy. AIDS 10.1097/QAD.0000000000003319. (In press). Green open access
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Ashiru-Oredope, Diane; Casale, Ella; Harvey, Eleanor; Umoh, Eno; Vasandani, Sagar; Reilly, Jacqui; Hopkins, Susan; (2022) Knowledge and Attitudes about Antibiotics and Antibiotic Resistance of 2404 UK Healthcare Workers. Antibiotics , 11 (8) , Article 1133. 10.3390/antibiotics11081133. Green open access
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Astbury, Stuart; Reynolds, Catherine J; Butler, David K; Munoz-Sandoval, Diana C; Lin, Kai-Min; Pieper, Franziska P; Otter, Ashley; ... Altmann, Daniel M; + view all (2022) HLA-DR polymorphism in SARS-CoV-2 infection and susceptibility to symptomatic COVID-19. Immunology , 166 (1) pp. 68-77. 10.1111/imm.13450. Green open access
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Atti, Ana; Insalata, Ferdinando; Carr, Edward J; Otter, Ashley D; Castillo-Olivares, Javier; Wu, Mary; Harvey, Ruth; ... SIREN Study Group and the Crick COVID Immunity Pipeline Consorti; + view all (2022) Antibody correlates of protection from SARS-CoV-2 reinfection prior to vaccination: a nested case-control within the SIREN study. Journal of Infection 10.1016/j.jinf.2022.09.004. (In press). Green open access
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Baisley, Kathy; Orne-Gliemann, Joanna; Larmarange, Joseph; Plazy, Melanie; Collier, Dami; Dreyer, Jaco; Mngomezulu, Thobeka; ... Iwuji, Collins; + view all (2022) Treat-all strategy and long-term survival among people living with HIV in South Africa: Results after 6 years of observation in the ANRS 12249 treatment as prevention trial. HIV Medicine 10.1111/hiv.13263. (In press). Green open access
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Baiyegunhi, OO; Mann, J; Khaba, T; Nkosi, T; Mbatha, A; Ogunshola, F; Chasara, C; ... Ndhlovu, ZM; + view all (2022) CD8 lymphocytes mitigate HIV-1 persistence in lymph node follicular helper T cells during hyperacute-treated infection. Nature communications , 13 , Article 4041. 10.1038/s41467-022-31692-8. Green open access
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Balloux, François; Tan, Cedric; Swadling, Leo; Richard, Damien; Jenner, Charlotte; Maini, Mala; van Dorp, Lucy; (2022) The past, current and future epidemiological dynamic of SARS-CoV-2. Oxford Open Immunology , 3 (1) , Article iqac003. 10.1093/oxfimm/iqac003. Green open access
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Basset, Alan; Wall, Emma; Mitsi, Elena; Deshusses, Chloe; Daly, Raecliffe; Pojar, Sherin; Reiné, Jesús; ... Malley, Richard; + view all (2022) Targeted Transcriptomic Screen of Pneumococcal Genes Expressed during Murine and Human Infection. Infection and Immunity , Article e0017522. 10.1128/iai.00175-22.

Bateson, Anna; Ortiz Canseco, Julio; McHugh, Timothy D; Witney, Adam A; Feuerriegel, Silke; Merker, Matthias; Kohl, Thomas A; ... Timm, Juliano; + view all (2022) Ancient and recent differences in the intrinsic susceptibility of Mycobacterium tuberculosis complex to pretomanid. Journal of Antimicrobial Chemotherapy , Article dkac070. 10.1093/jac/dkac070. (In press). Green open access
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Berry, Catherine; du Cros, Philipp; Fielding, Katherine; Gajewski, Suzanne; Kazounis, Emil; McHugh, Timothy D; Merle, Corinne; ... Nyang'wa, Bern-Thomas; + view all (2022) TB-PRACTECAL: study protocol for a randomised, controlled, open-label, phase II-III trial to evaluate the safety and efficacy of regimens containing bedaquiline and pretomanid for the treatment of adult patients with pulmonary multidrug-resistant tuberculosis. Trials , 23 , Article 484. 10.1186/s13063-022-06331-8. Green open access
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Bow, Steven MA; Goddard, Ashley; Cope, Gillian; Sharp, Nick; Schick, Jon; Woods, Claire; Jeffery, Katie; ... Tunkel, Sarah; + view all (2022) An evaluation of a pilot of daily testing of SARS-CoV-2 contacts in acute hospital and ambulance trusts in England. Public Health 10.1016/j.puhe.2022.05.013. (In press). Green open access
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Brown, Robin; Goulder, Philip; Matthews, Philippa C; (2022) Sexual Dimorphism in Chronic Hepatitis B Virus (HBV) Infection: Evidence to Inform Elimination Efforts [version 1; peer review: awaiting peer review]. Wellcome Open Research , 7 , Article 32. 10.12688/wellcomeopenres.17601.1. Green open access
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Brown, Robin; Goulder, Philip; Matthews, Philippa C; (2022) Sexual Dimorphism in Chronic Hepatitis B Virus (HBV) Infection: Evidence to Inform Elimination Efforts [version 2; peer review: 1 approved, 1 approved with reservations]. Wellcome Open Research , 7 , Article 32. 10.12688/wellcomeopenres.17601.2. Green open access
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Brown, Robin; Goulder, Philip; Matthews, Philippa C; (2022) Sexual Dimorphism in Chronic Hepatitis B Virus (HBV) Infection: Evidence to Inform Elimination Efforts [version 3; peer review: 2 approved]. Wellcome Open Research , 7 , Article 32. 10.12688/wellcomeopenres.17601.3. Green open access
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Campbell, Cori; Wang, Tingyan; Burrow, Rebekah; Mandal, Sema; Hippisley-Cox, Julia; Barnes, Eleanor; Matthews, Philippa C; (2022) Estimating the epidemiology of chronic Hepatitis B Virus (HBV) infection in the UK: what do we know and what are we missing? Wellcome Open Research , 7 , Article 203. 10.12688/wellcomeopenres.17941.1. Green open access
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Cantoni, Diego; Murray, Matthew; Kalemera, Mphatso; Dicken, Samuel; Stejskal, Lenka; Brown, Georgina; Lytros, Spyros; ... Grove, Joe; + view all (2022) Evolutionary remodelling of N-terminal domain loops fine-tunes SARS-CoV-2 spike. EMBO Reports , Article e54322. 10.15252/embr.202154322. (In press). Green open access
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Carr, Edward J; Wu, Mary; Harvey, Ruth; Billany, Roseanne E; Wall, Emma C; Kelly, Gavin; Haemodialysis COVID-19 Consortium, Crick COVID Immunity Pipeline; ... Beale, Rupert; + view all (2022) Omicron neutralising antibodies after COVID-19 vaccination in haemodialysis patients. Lancet 10.1016/S0140-6736(22)00104-0. (In press).

Castro, KG; Ditiu, L; Sahu, S; Ntoumi, F; Tiberi, S; O'Kane, CM; Akkerman, O; ... Zumla, A; + view all (2022) Optimising tuberculosis care for refugees affected by armed conflicts. The Lancet Respiratory Medicine , 10 (6) pp. 533-536. 10.1016/S2213-2600(22)00104-7.

Cele, Sandile; Jackson, Laurelle; Khoury, David S; Khan, Khadija; Moyo-Gwete, Thandeka; Tegally, Houriiyah; San, James Emmanuel; ... Sigal, Alex; + view all (2022) Omicron extensively but incompletely escapes Pfizer BNT162b2 neutralization. Nature , 602 (7898) pp. 654-656. 10.1038/s41586-021-04387-1. Green open access
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Chain, Gabriel S; Chain, Benjamin M; Pelliccia, Frances B; (2022) Climate Change Affects Health: Are We Listening? Global Pediatric Health , 9 10.1177/2333794X221091799. Green open access
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Chan, Jia Mun; Hackett, Kathleen T; Woodhams, Katelynn L; Schaub, Ryan E; Dillard, Joseph P; (2022) The AmiC/NlpD Pathway Dominates Peptidoglycan Breakdown in Neisseria meningitidis and Affects Cell Separation, NOD1 Agonist Production, and Infection. Infection and Immunity , 90 (3) , Article e00485-21. 10.1128/IAI.00485-21. Green open access
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Chanda-Kapata, P; Ntoumi, F; Kapata, N; Lungu, P; Mucheleng'anga, LA; Chakaya, J; Tembo, J; ... Nachega, JB; + view all (2022) Tuberculosis, HIV/AIDS and Malaria Health Services in sub-Saharan Africa – A Situation Analysis of the Disruptions and Impact of the COVID-19 Pandemic. International Journal of Infectious Diseases 10.1016/j.ijid.2022.03.033. (In press). Green open access
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Chandran, Aneesh; Rosenheim, Joshua; Nageswaran, Gayathri; Swadling, Leo; Pollara, Gabriele; Gupta, Rishi K; Burton, Alice R; ... Noursadeghi, Mahdad; + view all (2022) Rapid synchronous type 1 IFN and virus-specific T cell responses characterize first wave non-severe SARS-CoV-2 infections. Cell Reports Medicine , Article 100557. 10.1016/j.xcrm.2022.100557. (In press). Green open access
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Chibwana, MG; Moyo-Gwete, T; Kwatra, G; Mandolo, J; Hermanaus, T; Motlou, T; Mzindle, N; ... Jambo, KC; + view all (2022) AstraZeneca COVID-19 vaccine induces robust broadly cross-reactive antibody responses in Malawian adults previously infected with SARS-CoV-2. BMC Medicine , 20 (1) , Article 128. 10.1186/s12916-022-02342-z. Green open access
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Chidumwa, Glory; Chimbindi, Natsayi; Herbst, Carina; Okeselo, Nonhlanhla; Dreyer, Jaco; Zuma, Thembelihle; Smith, Theresa; ... Shahmanesh, Maryam; + view all (2022) Isisekelo Sempilo study protocol for the effectiveness of HIV prevention embedded in sexual health with or without peer navigator support (Thetha Nami) to reduce prevalence of transmissible HIV amongst adolescents and young adults in rural KwaZulu-Natal: a 2 × 2 factorial randomised controlled trial. BMC Public Health , 22 , Article 454. 10.1186/s12889-022-12796-8. Green open access
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Conradie, Francesca; Bagdasaryan, Tatevik R; Borisov, Sergey; Howell, Pauline; Mikiashvili, Lali; Ngubane, Nosipho; Samoilova, Anastasia; ... ZeNix Trial Team; + view all (2022) Bedaquiline–Pretomanid–Linezolid Regimens for Drug-Resistant Tuberculosis. New England Journal of Medicine , 387 (9) pp. 810-823. 10.1056/NEJMoa2119430.

Day, James W; Elfeky, Reem; Nicholson, Bethany; Goodman, Rupert; Pearce, Rachel; Fox, Thomas A; Worth, Austen; ... Morris, Emma C; + view all (2022) Retrospective, Landmark Analysis of Long-term Adult Morbidity Following Allogeneic HSCT for Inborn Errors of Immunity in Infancy and Childhood. Journal of Clinical Immunology 10.1007/s10875-022-01278-6. (In press). Green open access
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Day, James W; Fox, Thomas A; Gupta, Rajeev; Khwaja, Asim; Wilson, Andrew J; Kottaridis, Panagiotis D; (2022) Gilteritinib monotherapy as a transplant bridging option for high risk FLT3-mutated AML with t(6;9)(p23;q34.1);DEK-NUP214 in morphological but not cytogenetic or molecular remission following standard induction chemotherapy. Leukemia Research Reports , 17 , Article 100291. 10.1016/j.lrr.2022.100291. Green open access
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De Jong, VMT; Rousset, RZ; Antonio-Villa, NE; Buenen, AG; Van Calster, B; Bello-Chavolla, OY; Brunskill, NJ; ... Debray, TPA; + view all (2022) Clinical prediction models for mortality in patients with covid-19: external validation and individual participant data meta-analysis. The British Medical Journal , 378 , Article e069881. 10.1136/bmj-2021-069881. Green open access
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Dherani, MK; Pope, D; Tafatatha, T; Heinsbroek, E; Chartier, R; Mwalukomo, T; Crampin, A; ... Bruce, NG; + view all (2022) Association between household air pollution and nasopharyngeal pneumococcal carriage in Malawian infants (MSCAPE): a nested, prospective, observational study. The Lancet Global Health , 10 (2) e246-e256. 10.1016/S2214-109X(21)00405-8. Green open access
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Diniz, Mariana O; Mitsi, Elena; Swadling, Leo; Rylance, Jamie; Johnson, Marina; Goldblatt, David; Ferreira, Daniela; (2022) Airway-resident T cells from unexposed individuals cross-recognize SARS-CoV-2. Nature Immunology 10.1038/s41590-022-01292-1. (In press). Green open access
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Diniz, Mariana O; Schurich, Anna; Chinnakannan, Senthil K; Duriez, Marion; Stegmann, Kerstin A; Davies, Jessica; Kucykowicz, Stephanie; ... Maini, Mala K; + view all (2022) NK cells limit therapeutic vaccine-induced CD8+T cell immunity in a PD-L1-dependent manner. Science Translational Medicine , 14 (640) , Article eabi4670. 10.1126/scitranslmed.abi4670. Green open access
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Donnadieu, Emmanuel; Luu, Maik; Alb, Miriam; Anliker, Brigitte; Arcangeli, Silvia; Bonini, Chiara; De Angelis, Biagio; ... Casucci, Monica; + view all (2022) Time to evolve: predicting engineered T cell-associated toxicity with next-generation models. Journal for ImmunoTherapy of Cancer , 10 (5) , Article e003486. 10.1136/jitc-2021-003486. Green open access
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El-Kafrawy, SA; Hassan, AM; El-Daly, MM; Al-Hajri, M; Farag, E; Elnour, FA; Khan, A; ... Azhar, EI; + view all (2022) Genetic diversity of hepatitis E virus (HEV) in imported and domestic camels in Saudi Arabia. Scientific Reports , 12 , Article 7005. 10.1038/s41598-022-11208-6. Green open access
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El-Kafrawy, Sherif A; Alsayed, Salma M; Alandijany, Thamir A; Bajrai, Leena H; Faizo, Arwa A; Al-Sharif, Hessa A; Hassan, Ahmed M; ... Azhar, Esam I; + view all (2022) High Genetic Diversity of Human Rhinovirus among Pilgrims with Acute Respiratory Tract Infections during 2019 Hajj Pilgrimage Season. International Journal of Infectious Diseases 10.1016/j.ijid.2022.05.027. (In press). Green open access
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Ellis, Jayne; Harvey, David; Defres, Sylviane; Chandna, Arjun; MacLachlan, Eloisa; Solomon, Tom; Heyderman, Robert S; ... National Audit of Meningitis Management (NAMM) group; + view all (2022) Clinical management of community-acquired meningitis in adults in the UK and Ireland in 2017: a retrospective cohort study on behalf of the National Infection Trainees Collaborative for Audit and Research (NITCAR). BMJ Open , 12 (7) , Article e062698. 10.1136/bmjopen-2022-062698. Green open access
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Enne, Virve I; Aydin, Alp; Baldan, Rossella; Owen, Dewi R; Richardson, Hollian; Ricciardi, Federico; Russell, Charlotte; ... INHALE WP1 Study Group; + view all (2022) Multicentre evaluation of two multiplex PCR platforms for the rapid microbiological investigation of nosocomial pneumonia in UK ICUs: the INHALE WP1 study. Thorax 10.1136/thoraxjnl-2021-216990. (In press). Green open access
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Evangelopoulos, D; Shoen, CM; Honeyborne, I; Clark, S; Williams, A; Mukamolova, GV; Cynamon, MH; (2022) Culture-Free Enumeration of Mycobacterium tuberculosis in Mouse Tissues Using the Molecular Bacterial Load Assay for Preclinical Drug Development. Microorganisms , 10 (2) , Article 460. 10.3390/microorganisms10020460. Green open access
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Fajgenbaum, David C; Hayday, Adrian C; Rogers, Angela J; Towers, Gregory J; Wack, Andreas; Zanoni, Ivan; (2022) Anti-type I interferon antibodies as a cause of severe COVID-19. Faculty Reviews , 11 , Article 15. 10.12703/r-01-0000010.

Farahat, Ramadan Abdelmoez; Abdelaal, Abdelaziz; Shah, Jaffer; Ghozy, Sherief; Sah, Ranjit; Bonilla-Aldana, D Katterine; Rodriguez-Morales, Alfonso J; ... Leblebicioglu, Hakan; + view all (2022) Monkeypox outbreaks during COVID-19 pandemic: are we looking at an independent phenomenon or an overlapping pandemic? Annals of Clinical Microbiology and Antimicrobials , 21 (1) , Article 26. 10.1186/s12941-022-00518-2. Green open access
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Fendler, Annika; Shepherd, Scott TC; Au, Lewis; Wu, Mary; Harvey, Ruth; Schmitt, Andreas M; Tippu, Zayd; ... CAPTURE consortium; + view all (2022) Omicron neutralising antibodies after third COVID-19 vaccine dose in patients with cancer. The Lancet 10.1016/S0140-6736(22)00147-7. (In press). Green open access
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Fink, Douglas L; Cai, James; Whelan, Matthew VX; Monit, Christopher; Maluquer de Motes, Carlos; Towers, Greg J; Sumner, Rebecca P; (2022) HIV-2/SIV Vpx antagonises NF-κB activation by targeting p65. Retrovirology , 19 (1) , Article 2. 10.1186/s12977-021-00586-w. Green open access
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Fisher, Kimone L; Rajkumar-Bhugeloo, Kerishka; Moodley, Denelle; Mpotje, Thabo; Ramsuran, Duran; Ndung'u, Thumbi; Marakalala, Mohlopheni J; (2022) Investigating neutrophil cell death in TB pathogenesis. Gates Open Research , 5 , Article 175. 10.12688/gatesopenres.13472.2. Green open access
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Flewellen, James L; Minoughan, Sophie; Garcia, Isabel Llorente; Tolar, Pavel; (2022) Digital holography-based 3D particle localization for single-molecule tweezer techniques. Biophysical Journal 10.1016/j.bpj.2022.06.001. (In press). Green open access
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Garcia-Basteiro, AL; White, RG; Tait, D; Schmidt, AC; Rangaka, MX; Quaife, M; Nemes, E; ... Hatherill, M; + view all (2022) End-point definition and trial design to advance tuberculosis vaccine development. European respiratory review : an official journal of the European Respiratory Society , 31 (164) , Article 220044. 10.1183/16000617.0044-2022. Green open access
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Gehring, Adam J; Mendez, Patricia; Richter, Kirsten; Ertl, Hildegund; Donaldson, Eric F; Mishra, Poonam; Maini, Mala; ... Miller, Veronica; + view all (2022) Immunological Biomarker Discovery in Cure Regimens for Chronic Hepatitis B Virus Infection. Journal of Hepatology , 77 (2) pp. 525-538. 10.1016/j.jhep.2022.02.020. Green open access
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Gil, Eliza; Venturini, Cristina; Stirling, David; Turner, Carolin; Tezera, Liku B; Ercoli, Giuseppe; Baker, Tina; ... Noursadeghi, Mahdad; + view all (2022) Pericyte derived chemokines amplify neutrophil recruitment across the cerebrovascular endothelial barrier. Frontiers in Immunology , 13 , Article 935798. 10.3389/fimmu.2022.935798. Green open access
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Gladstone, RA; Siira, L; Brynildsrud, OB; Vestrheim, DF; Turner, P; Clarke, SC; Srifuengfung, S; ... von Gottberg, A; + view all (2022) International links between Streptococcus pneumoniae vaccine serotype 4 sequence type (ST) 801 in Northern European shipyard outbreaks of invasive pneumococcal disease. Vaccine 10.1016/j.vaccine.2021.10.046. (In press). Green open access
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Greenhalgh, T; Griffin, S; Gurdasani, D; Hamdy, A; Katzourakis, A; McKee, M; Michie, S; ... Ziauddeen, H; + view all (2022) Covid-19: An urgent call for global "vaccines-plus" action. BMJ: British Medical Journal , 376 , Article o1. 10.1136/bmj.o1. Green open access
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Guedan, Sonia; Luu, Maik; Ammar, Delphine; Barbao, Paula; Bonini, Chiara; Bousso, Philippe; Buchholz, Christian J; ... Marchiq, Ibtissam; + view all (2022) Time 2EVOLVE: predicting efficacy of engineered T-cells - how far is the bench from the bedside? Journal for ImmunoTherapy of Cancer , 10 (5) , Article e003487. 10.1136/jitc-2021-003487. Green open access
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Haider, Muhammad Hayat; McHugh, Timothy D; Roulston, Kerry; Arruda, Lia Barbara; Sadouki, Zahra; Riaz, Saba; (2022) Detection of carbapenemases blaOXA48-blaKPC-blaNDM-blaVIM and extended-spectrum-β-lactamase blaOXA1-blaSHV-blaTEM genes in Gram-negative bacterial isolates from ICU burns patients. Annals of Clinical Microbiology and Antimicrobials , 21 (1) , Article 18. 10.1186/s12941-022-00510-w. Green open access
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Haider, Najmul; Guitian, Javier; Simons, David; Asogun, Danny; Ansumana, Rashid; Honeyborne, Isobella; Velavan, Thirumalaisamy P; ... Zumla, Alimuddin; + view all (2022) Increased outbreaks of monkeypox highlight gaps in actual disease burden in Sub-Saharan Africa and in animal reservoirs. International Journal of Infectious Diseases , 122 pp. 107-111. 10.1016/j.ijid.2022.05.058. Green open access
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Haimel, M; Pazmandi, J; Jiménez Heredia, R; Dmytrus, J; Bal, SK; Zoghi, S; Van Daele, P; ... Boztug, K; + view all (2022) Curation and Expansion of Human Phenotype Ontology for Defined Groups of Inborn Errors of Immunity. Journal of Allergy and Clinical Immunology , 149 (1) pp. 369-378. 10.1016/j.jaci.2021.04.033. Green open access
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Hall, Victoria; Foulkes, Sarah; Insalata, Ferdinando; Kirwan, Peter; Saei, Ayoub; Atti, Ana; Wellington, Edgar; ... Hopkins, Susan; + view all (2022) Protection against SARS-CoV-2 after Covid-19 Vaccination and Previous Infection. New England Journal of Medicine , 386 (13) pp. 1207-1220. 10.1056/NEJMoa2118691.

Han, Mingyu; Cantaloube-Ferrieu, Vincent; Xie, Maorong; Armani-Tourret, Marie; Woottum, Marie; Pagès, Jean-Christophe; Colin, Philippe; ... Benichou, Serge; + view all (2022) HIV-1 cell-to-cell spread overcomes the virus entry block of non-macrophage-tropic strains in macrophages. PLoS Pathogens , 18 (5) , Article e1010335. 10.1371/journal.ppat.1010335. Green open access
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Himwaze, C; Mucheleng'anga, LA; Telendiy, V; Hamukale, A; Tembo, J; Kapata, N; Ntoumi, F; (2022) Cardiac Cysticercosis and Neuro Cysticercosis in Sudden and Unexpected Community Deaths in Lusaka, Zambia – A Descriptive Medico-Legal Post-Mortem Examination Study. International Journal of Infectious Diseases , 115 pp. 195-200. 10.1016/j.ijid.2021.11.042. Green open access
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Hodgson, SH; Sinclair, VJ; Arwyn-Jones, J; Oh, K; Nucken, K; Perenyei, M; Sivapathasingam, V; ... Andersson, MI; + view all (2022) Characteristics, management and outcome of a large necrotising otitis externa case series: need for standardised case definition. Journal of Laryngology and Otology , 136 (7) pp. 604-610. 10.1017/S002221512100462X. Green open access
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Howell, Rowan; Clarke, Matthew A; Reuschl, Ann-Kathrin; Chen, Tianyi; Abbott-Imboden, Sean; Singer, Mervyn; Lowe, David M; ... Fisher, Jasmin; + view all (2022) Executable network of SARS-CoV-2-host interaction predicts drug combination treatments. npj Digital Medicine , 5 (1) , Article 18. 10.1038/s41746-022-00561-5. Green open access
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Huggett, Jim F; French, David; O’Sullivan, Denise M; Moran-Gilad, Jacob; Zumla, Alimuddin; (2022) Monkeypox: another test for PCR. Eurosurveillance , 27 (32) , Article 2200497. 10.2807/1560-7917.es.2022.27.32.2200497. Green open access
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Hui, David SC; Zumla, Alimuddin; (2022) Advances in the epidemiology, clinical features, diagnosis, clinical management and prevention of coronavirus disease 2019. Current Opinion in Pulmonary Medicine , 28 (3) pp. 166-173. 10.1097/MCP.0000000000000875.

Iroh Tam, PY; Chirombo, J; Henrion, M; Newberry, L; Mambule, I; Everett, D; Mwansambo, C; ... Bar-Zeev, N; + view all (2022) Clinical pneumonia in the hospitalised child in Malawi in the post-pneumococcal conjugate vaccine era: A prospective hospital-based observational study. BMJ Open , 12 (2) , Article e050188. 10.1136/bmjopen-2021-050188. Green open access
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Jeffery-Smith, A; Burton, AR; Lens, S; Rees-Spear, C; Davies, J; Patel, M; Gopal, R; ... Maini, MK; + view all (2022) SARS-CoV-2-specific memory B cells can persist in the elderly who have lost detectable neutralising antibodies. Journal of Clinical Investigation , 132 (2) , Article e152042.. 10.1172/JCI152042. Green open access
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Jeremiah, C; Petersen, E; Nantanda, R; Mungai, BN; Migliori, GB; Amanullah, F; Lungu, P; ... Zumla, A; + view all (2022) The WHO Global Tuberculosis 2021 Report – not so good news and turning the tide back to End TB. International Journal of Infectious Diseases 10.1016/j.ijid.2022.03.011. (In press). Green open access
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Joshi, K; Milighetti, M; Chain, BM; (2022) Application of T cell receptor (TCR) repertoire analysis for the advancement of cancer immunotherapy. Current Opinion in Immunology , 74 pp. 1-8. 10.1016/j.coi.2021.07.006. Green open access
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Kapata, N; Zumla, A; (2022) Preventing pellagra during isoniazid preventive treatment. The Lancet Global Health , 10 (5) e600-e601. 10.1016/S2214-109X(22)00163-2. Green open access
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Keep, Sarah; Stevenson-Leggett, Phoebe; Dowgier, Giulia; Everest, Holly; Freimanis, Graham; Oade, Michael; Hammond, John A; ... Bickerton, Erica; + view all (2022) Identification of Amino Acids within Nonstructural Proteins 10 and 14 of the Avian Coronavirus Infectious Bronchitis Virus That Result in Attenuation In Vivo and In Ovo. Journal of Virology , 96 (6) , Article e02059-21. 10.1128/jvi.02059-21. Green open access
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Keep, Sarah; Stevenson-Leggett, Phoebe; Dowgier, Giulia; Foldes, Katalin; Webb, Isobel; Fones, Albert; Littolff, Kieran; ... Bickerton, Erica; + view all (2022) A Temperature-Sensitive Recombinant of Avian Coronavirus Infectious Bronchitis Virus Provides Complete Protection against Homologous Challenge. Journal of Virology 10.1128/jvi.01100-22. (In press). Green open access
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Kemp, Steven A; Charles, Oscar J; Derache, Anne; Smidt, Werner; Martin, Darren P; Iwuji, Collins; Adamson, John; ... Gupta, Ravindra K; + view all (2022) HIV-1 Evolutionary Dynamics under Nonsuppressive Antiretroviral Therapy. mBio 10.1128/mbio.00269-22. (In press). Green open access
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Suleman, Saqlain; Payne, Annette; Bowden, Johnathan; Haque, Sharmin Al; Zahn, Marco; Fawaz, Serena; Khalifa, Mohammad S; ... Themis, Michael; + view all (2022) HIV- 1 lentivirus tethering to the genome is associated with transcription factor binding sites found in genes that favour virus survival. Gene Therapy 10.1038/s41434-022-00335-4. (In press). Green open access
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Swadling, L; Diniz, MO; Schmidt, NM; Amin, OE; Chandran, A; Shaw, E; Pade, C; ... Maini, MK; + view all (2022) Pre-existing polymerase-specific T cells expand in abortive seronegative SARS-CoV-2. Nature , 601 pp. 110-117. 10.1038/s41586-021-04186-8. Green open access
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Swarthout, Todd D; Henrion, Marc YR; Thindwa, Deus; Meiring, James E; Mbewe, Maurice; Kalizang'Oma, Akuzike; Brown, Comfort; ... Heyderman, Robert S; + view all (2022) Waning of antibody levels induced by a 13-valent pneumococcal conjugate vaccine, using a 3 + 0 schedule, within the first year of life among children younger than 5 years in Blantyre, Malawi: an observational, population-level, serosurveillance study. Lancet Infectious Diseases 10.1016/S1473-3099(22)00438-8. (In press). Green open access
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Takeuchi, Yasuhiro; (2022) Special Issue "Lentiviral Vectors". Viruses , 14 (7) , Article 1492. 10.3390/v14071492. Green open access
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Tan, YY; O’Dea, KP; Patel, BV; Takata, M; (2022) Investigation of Microvesicle Uptake by Mouse Lung-marginated Monocytes in vitro. Bio-protocol , 12 (3) , Article e4307. 10.21769/BioProtoc.4307. Green open access
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Tembo, John; Egbe, Nkongho Franklyn; Maluzi, Kwitaka; Mulonga, Kangwa; Chilufya, Moses; Kapata, Nathan; Mukonka, Victor; ... Bates, Matthew; + view all (2022) Evaluation of SARS-CoV-2 diagnostics and risk factors associated with SARS-CoV-2 infection in Zambia. International Journal of Infectious Diseases 10.1016/j.ijid.2022.04.017. (In press). Green open access
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Thindwa, D; Jambo, KC; Ojal, J; MacPherson, P; Dennis Phiri, M; Pinsent, A; Khundi, M; ... Flasche, S; + view all (2022) Social mixing patterns relevant to infectious diseases spread by close contact in urban Blantyre, Malawi. Epidemics , 40 , Article 100590. 10.1016/j.epidem.2022.100590. (In press). Green open access
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Thorne, LG; Bouhaddou, M; Reuschl, AK; Zuliani-Alvarez, L; Polacco, B; Pelin, A; Batra, J; ... Krogan, NJ; + view all (2022) Evolution of enhanced innate immune evasion by SARS-CoV-2. Nature , 602 pp. 487-495. 10.1038/s41586-021-04352-y. Green open access
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Thorne, Lucy G; Bouhaddou, Mehdi; Reuschl, Ann-Kathrin; Zuliani-Alvarez, Lorena; Polacco, Ben; Pelin, Adrian; Batra, Jyoti; ... Krogan, Nevan J; + view all (2022) Publisher Correction: Evolution of enhanced innate immune evasion by SARS-CoV-2. Nature 10.1038/s41586-022-04653-w. Green open access
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Tiberi, Simon; Utjesanovic, Natasa; Galvin, Jessica; Centis, Rosella; D'Ambrosio, Lia; van den Boom, Martin; Zumla, Alimuddin; (2022) Drug resistant TB - latest developments in epidemiology, diagnostics and management. International Journal of Infectious Diseases 10.1016/j.ijid.2022.03.026. (In press). Green open access
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Tsakok, MT; Watson, RA; Lumley, SF; Khan, F; Qamhawi, Z; Lodge, A; Xie, C; ... Gleeson, F; + view all (2022) Parenchymal involvement on CT pulmonary angiography in SARS-CoV-2 Alpha variant infection and correlation of COVID-19 CT severity score with clinical disease severity and short-term prognosis in a UK cohort. Clinical Radiology , 77 (2) pp. 148-155. 10.1016/j.crad.2021.11.002. Green open access
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Uddin, Fakhur; Sohail, Muhammad; Shaikh, Qurban Hussain; Hussain, Mir Tahir; Roulston, Kerry; McHugh, Timothy Daniel; (2022) Verona integron encoded metallo Beta lactamase (VIM) and Vietnam extended spectrum Beta lactamase (VEB) producing Pseudomonas balearica from a clinical specimen. JPMA. The Journal of the Pakistan Medical Association , 72 (4) pp. 761-763. 10.47391/JPMA.3890. Green open access
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Varona, JF; Landete, P; Lopez-Martin, JA; Estrada, V; Paredes, R; Guisado-Vasco, P; Fernandez de Orueta, L; ... Garcia-Sastre, A; + view all (2022) Preclinical and randomized phase I studies of plitidepsin in adults hospitalized with COVID-19. Life Science Alliance , 5 (4) , Article e202101200. 10.26508/lsa.202101200. Green open access
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Walker, LSK; (2022) The link between circulating follicular helper T cells and autoimmunity. Nature Reviews Immunology 10.1038/s41577-022-00693-5. Green open access
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Wang, Tingyan; Smith, David A; Campbell, Cori; Freeman, Oliver; Moysova, Zuzana; Noble, Theresa; Varnai, Kinga A; ... Matthews, Philippa C; + view all (2022) Cohort Profile: The National Institute for Health Research Health Informatics Collaborative: Hepatitis B Virus (NIHR HIC HBV) research dataset. International Journal of Epidemiology 10.1093/ije/dyac127. (In press). Green open access
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Warnatz, Klaus; Jolles, Stephen; Agostini, Carlo; Vianello, Fabrizio; Borte, Michael; Bethune, Claire; Grigoriadou, Sofia; ... Cook, Matthew C; + view all (2022) Subcutaneous Gammanorm® by pump or rapid push infusion: Impact of the device on quality of life in adult patients with primary immunodeficiencies. Clinical Immunology , 236 , Article 108938. 10.1016/j.clim.2022.108938.

Watkins, Eleanor Rose; Kalizang'Oma, Akuzike; Gori, Andrea; Gupta, Sunetra; Heyderman, Robert S; (2022) Factors affecting antimicrobial resistance in Streptococcus pneumoniae following vaccination introduction. Trends in Microbiology 10.1016/j.tim.2022.06.001. (In press).

Wu, Mary; Wall, Emma C; Carr, Edward J; Harvey, Ruth; Townsley, Hermaleigh; Mears, Harriet V; Adams, Lorin; ... Bauer, David LV; + view all (2022) Three-dose vaccination elicits neutralising antibodies against omicron. The Lancet 10.1016/S0140-6736(22)00092-7. (In press). Green open access
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Yetiş, Özge; Ali, Shanom; Karia, Kush; Wilson, Peter; (2022) Failure of a hollow-fibre shower filter device to prevent exposure of patients to Pseudomonas aeruginosa. Journal of Hospital Infection 10.1016/j.jhin.2022.08.007. (In press). Green open access
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Yoshida, M; Worlock, KB; Huang, N; Lindeboom, RGH; Butler, CR; Kumasaka, N; Conde, CD; ... Meyer, KB; + view all (2022) Local and systemic responses to SARS-CoV-2 infection in children and adults. Nature , 602 pp. 321-327. 10.1038/s41586-021-04345-x. Green open access
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Zakeri, N; Hall, A; Swadling, L; Pallett, LJ; Schmidt, NM; Diniz, MO; Kucykowicz, S; ... Maini, MK; + view all (2022) Characterisation and induction of tissue-resident gamma delta T-cells to target hepatocellular carcinoma. Nature Communications , 13 , Article 1372. 10.1038/s41467-022-29012-1. Green open access
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Zhou, Tongqing; Chen, Lei; Gorman, Jason; Wang, Shuishu; Kwon, Young D; Lin, Bob C; Louder, Mark K; ... Kwong, Peter D; + view all (2022) Structural basis for llama nanobody recognition and neutralization of HIV-1 at the CD4-binding site. Structure , 30 (6) 862-875.e4. 10.1016/j.str.2022.03.012.

Zhuang, Xiaodong; Wang, Wei; Borrmann, Helene; Balfe, Peter; Matthews, Philippa C; Eyre, David W; Klerman, Elizabeth B; (2022) Time-of-Day Variation in SARS-CoV-2 RNA Levels during the Second Wave of COVID-19. Viruses , 14 (8) , Article 1728. 10.3390/v14081728. Green open access
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Zumla, A; Valdoleiros, SR; Haider, N; Asogun, D; Ntoumi, F; Petersen, E; Kock, R; (2022) Monkeypox outbreaks outside endemic regions: scientific and social priorities. The Lancet Infectious Diseases , 22 (7) pp. 929-931. 10.1016/S1473-3099(22)00354-1. Green open access
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Zumla, Alimuddin; Hui, David SC; (2022) Editorial: Coronavirus disease 2019 (COVID-19) - advances in epidemiology, diagnostics, treatments, host-directed therapies, pathogenesis, vaccines, and ongoing challenges. Current Opinion in Pulmonary Medicine , 28 (3) pp. 163-165. 10.1097/MCP.0000000000000872.

Zumla, Alimuddin; Traore, Tieble; Amao, Lateefat; Ntoumi, Francine; Sharma, Avinash; Azhar, Esam I; Abbara, Aula; (2022) Reducing the threat of epidemic-prone infections at mass gathering religious events. The Lancet , 400 (10346) pp. 80-82. 10.1016/S0140-6736(22)01194-1.

Working / discussion paper

Badenoch, James B; Conti, Isabella; Rengasamy, Emma R; Watson, Cameron J; Butler, Matt; Hussain, Zain; Rooney, Alasdair G; ... Rogers, Jonathan P; + view all (2022) Neurological and psychiatric presentations associated with human monkeypox virus infection: a systematic review and meta-analysis. Cold Spring Harbor Laboratory: Cold Spring Harbor (NY), USA. Green open access
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Lourenço, José; McNaughton, Anna; Pley, Caitlin; Obolski, Uri; Gupta, Sunetra; Matthews, Philippa; (2022) Polymorphisms Predicting Phylogeny in Hepatitis B Virus (HBV). bioRxiv: NY, USA. Green open access
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Thesis

Collier, Oluwadamilola Aderonke; (2022) Within-host evolution and virus escape of two important pandemic viruses. Doctoral thesis (Ph.D), UCL (University College London). Green open access
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El Bouzidi, Kate; (2022) Clinical and HIV determinants of antiretroviral therapy response in a Nigerian subtype G/CRF02_AG epidemic. Doctoral thesis (Ph.D), UCL (University College London).

Fox, Thomas Andrew; (2022) Towards Gene Therapy for CTLA4 Insufficiency. Doctoral thesis (Ph.D), UCL (University College London).

Kalemera, Mphatso Dumisani; (2022) The interplay between HCV E1E2 glycoproteins and host receptors regulates entry efficiency and antibody evasion. Doctoral thesis (Ph.D), UCL (University College London). Green open access
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Kalizang'oma, Akuzike; (2022) Genomic analyses of Streptococcus mitis and its role as an oral commensal, pathogen, and reservoir of antimicrobial resistance for Streptococcus pneumoniae through horizontal gene transfer. Doctoral thesis (Ph.D), UCL (University College London).

Williams, Cayman; (2022) Investigating CD28 co-stimulation in the control of human T cell activation. Doctoral thesis (Ph.D), UCL (University College London).

Zakeri, Nekisa; (2022) Characterisation and therapeutic harnessing of liver-resident gamma delta T cells to target hepatocellular carcinoma. Doctoral thesis (Ph.D), UCL (University College London).

This list was generated on Mon Sep 26 02:23:19 2022 BST.