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Article

Adey, BN; Cooper-Knock, J; Al Khleifat, A; Fogh, I; van Damme, P; Corcia, P; Couratier, P; ... Iacoangeli, A; + view all (2023) Large-scale analyses of CAV1 and CAV2 suggest their expression is higher in post-mortem ALS brain tissue and affects survival. Frontiers in Cellular Neuroscience , 17 , Article 1112405. 10.3389/fncel.2023.1112405. Green open access
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Al Khleifat, A; Iacoangeli, A; Jones, AR; van Vugt, JJFA; Moisse, M; Shatunov, A; Zwamborn, RAJ; ... Al-Chalabi, A; + view all (2022) Telomere length analysis in amyotrophic lateral sclerosis using large-scale whole genome sequence data. Frontiers in Cellular Neuroscience , 16 , Article 1050596. 10.3389/fncel.2022.1050596. Green open access
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Al Khleifat, Ahmad; Iacoangeli, Alfredo; Van Vugt, Joke JFA; Bowles, Harry; Moisse, Matthieu; Zwamborn, Ramona AJ; Van der Spek, Rick AA; ... Al-Chalabi, Ammar; + view all (2022) Structural variation analysis of 6,500 whole genome sequences in amyotrophic lateral sclerosis. npj Genomic Medicine , 7 , Article 8. 10.1038/s41525-021-00267-9. Green open access
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Al Khleifat, A; Iacoangeli, A; Shatunov, A; Fang, T; Sproviero, W; Jones, AR; Opie-Martin, S; ... Al-Chalabi, A; + view all (2019) Telomere length is greater in ALS than in controls: a whole genome sequencing study. Amyotrophic Lateral Sclerosis and Frontotemporal Degeneration , 20 (3-4) pp. 229-234. 10.1080/21678421.2019.1586951. Green open access
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Allen, GI; Amoroso, N; Anghel, C; Balagurusamy, V; Bare, CJ; Beaton, D; Bellotti, R; ... Zhu, S; + view all (2016) Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease. Alzheimer's & Dementia , 12 (6) pp. 645-653. 10.1016/j.jalz.2016.02.006. Green open access
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Althobiani, Malik A; Ranjan, Yatharth; Jacob, Joseph; Orini, Michele; Dobson, Richard James Butler; Porter, Joanna C; Hurst, John R; (2023) Evaluating a Remote Monitoring Program for Respiratory Diseases: Prospective Observational Study. JMIR Formative Research , 7 , Article e51507. 10.2196/51507. Green open access
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Althobiani, Malik A; Ranjan, Yatharth; Russell, Anne-Marie; Jacob, Joseph; Orini, Michele; Sankesara, Heet; Conde, Pauline; ... Folarin, Amos A; + view all (2024) Home monitoring to detect progression of interstitial lung disease: A prospective cohort study. Respirology 10.1111/resp.14708. Green open access
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Altimiras, F; Uszczynska-Ratajczak, B; Camara, F; Vlasova, A; Palumbo, E; Newhouse, S; Deacon, RMJ; ... Cogram, P; + view all (2017) Brain Transcriptome Sequencing of a Natural Model of Alzheimer's Disease. Frontiers in Aging Neuroscience , 9 , Article 64. 10.3389/fnagi.2017.00064. Green open access
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Baker, E; Iqbal, E; Johnston, C; Broadbent, M; Shetty, H; Stewart, R; Howard, R; ... Dobson, RJB; + view all (2017) Trajectories of dementia-related cognitive decline in a large mental health records derived patient cohort. PLoS One , 12 (6) 10.1371/journal.pone.0178562. Green open access
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Bean, Daniel M; Kraljevic, Zeljko; Shek, Anthony; Teo, James; Dobson, Richard JB; (2023) Hospital-wide natural language processing summarising the health data of 1 million patients. PLOS Digit Health , 2 (5) , Article e0000218. 10.1371/journal.pdig.0000218. Green open access
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Bean, DM; Al-Chalabi, A; Dobson, RJB; Iacoangeli, A; (2020) A Knowledge-Based Machine Learning Approach to Gene Prioritisation in Amyotrophic Lateral Sclerosis. Genes , 11 (6) , Article 668. 10.3390/genes11060668. Green open access
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Bean, DM; Kraljevic, Z; Searle, T; Bendayan, R; Kevin O, G; Pickles, A; Folarin, A; ... Dobson, RJ; + view all (2020) ACE-inhibitors and Angiotensin-2 Receptor Blockers are not associated with severe SARS-COVID19 infection in a multi-site UK acute Hospital Trust. European Journal of Heart Failure , 22 (6) pp. 967-974. 10.1002/ejhf.1924. Green open access
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Bean, DM; Stringer, C; Beeknoo, N; Teo, J; Dobson, RJB; (2017) Network analysis of patient flow in two UK acute care hospitals identifies key sub-networks for A&E performance. PLoS One , 12 (10) , Article e0185912. 10.1371/journal.pone.0185912. Green open access
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Bean, DM; Taylor, P; Dobson, RJB; (2018) A patient flow simulator for healthcare management education. BMJ Simulation and Technology Enhanced Learning , 5 (1) pp. 46-48. 10.1136/bmjstel-2017-000251. Green open access
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Bean, DM; Teo, J; Wu, H; Oliveira, R; Patel, R; Bendayan, R; Shah, AM; ... Scott, PA; + view all (2019) Semantic computational analysis of anticoagulation use in atrial fibrillation from real world data. PLOS ONE , 14 (11) , Article e0225625. 10.1371/journal.pone.0225625. Green open access
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Bean, DM; Wu, H; Dzahini, O; Broadbent, M; Stewart, R; Dobson, RJB; (2017) Knowledge graph prediction of unknown adverse drug reactions and validation in electronic health records. Scientific Reports , 7 , Article 16416. 10.1038/s41598-017-16674-x. Green open access
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Bean, DM; Wu, H; Iqbal, E; Dzahini, O; Ibrahim, ZM; Broadbent, M; Stewart, R; (2018) Author Correction: Knowledge graph prediction of unknown adverse drug reactions and validation in electronic health records. [Corrigendum]. Scientific Reports , 8 , Article 4284. 10.1038/s41598-018-22521-4. Green open access
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Bechman, K; Yates, M; Mann, K; Nagra, D; Smith, LJ; Rutherford, AI; Patel, A; ... Norton, S; + view all (2022) Inpatient COVID-19 mortality has reduced over time: Results from an observational cohort. PLoS ONE , 17 , Article e0261142. 10.1371/journal.pone.0261142. Green open access
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Bendayan, Rebecca; Kraljevic, Zeljko; Shaari, Shaweena; Das-Munshi, Jayati; Leipold, Leona; Chaturvedi, Jaya; Mirza, Luwaiza; ... Dobson, Richard; + view all (2022) Mapping multimorbidity in individuals with schizophrenia and bipolar disorders: evidence from the South London and Maudsley NHS Foundation Trust Biomedical Research Centre (SLAM BRC) case register. BMJ Open , 12 (1) , Article e054414. 10.1136/bmjopen-2021-054414. Green open access
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Bendayan, R; Mascio, A; Stewart, R; Roberts, A; Dobson, RJ; (2020) Cognitive Trajectories in Comorbid Dementia With Schizophrenia or Bipolar Disorder: The South London and Maudsley NHS Foundation Trust Biomedical Research Centre (SLaM BRC) Case Register. The American Journal of Geriatric Psychiatry 10.1016/j.jagp.2020.10.018. (In press). Green open access
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Bendayan, R; Zhu, Y; Federman, AD; Dobson, RJB; (2021) Multimorbidity patterns and memory trajectories in older adults: Evidence from the English Longitudinal Study of Ageing. The Journals of Gerontology: Series A 10.1093/gerona/glab009. (In press). Green open access
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Bos, I; Vos, S; Vandenberghe, R; Scheltens, P; Engelborghs, S; Frisoni, G; Luis Molinuevo, J; ... Visser, PJ; + view all (2018) The EMIF-AD Multimodal Biomarker Discovery study: design, methods and cohort characteristics. Alzheimer's Research & Therapy , 10 , Article 64. 10.1186/s13195-018-0396-5. Green open access
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Brakenhoff, TB; Franks, B; Goodale, BM; Van de Wijgert, J; Montes, S; Veen, D; Fredslund, EK; ... COVID-RED Consortium; + view all (2021) A prospective, randomized, single-blinded, crossover trial to investigate the effect of a wearable device in addition to a daily symptom diary for the Remote Early Detection of SARS-CoV-2 infections (COVID-RED): a structured summary of a study protocol for a randomized controlled trial. Trials , 22 , Article 694. 10.1186/s13063-021-05643-5. Green open access
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Brakenhoff, TB; Franks, B; Goodale, BM; van de Wijgert, J; Montes, S; Veen, D; Fredslund, EK; ... COVID-RED Consortium; + view all (2021) A prospective, randomized, single-blinded, crossover trial to investigate the effect of a wearable device in addition to a daily symptom diary for the remote early detection of SARS-CoV-2 infections (COVID-RED): a structured summary of a study protocol for a randomized controlled trial. Trials , 22 , Article 412. 10.1186/s13063-021-05241-5. Green open access
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Carbajosa, G; Malki, K; Lawless, N; Wang, H; Ryder, JW; Wozniak, E; Wood, K; ... Newhouse, SJ; + view all (2018) Loss of Trem2 in microglia leads to widespread disruption of cell coexpression networks in mouse brain. Neurobiology of Aging , 69 pp. 151-166. 10.1016/j.neurobiolaging.2018.04.019. Green open access
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Carr, E; Bendayan, R; Bean, D; Stammers, M; Wang, W; Zhang, H; Searle, T; ... Dobson, RJB; + view all (2021) Evaluation and improvement of the National Early Warning Score (NEWS2) for COVID-19: a multi-hospital study. BMC Medicine , 19 , Article 23. 10.1186/s12916-020-01893-3. Green open access
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Carr, E; Federman, A; Dzahini, O; Dobson, RJ; Bendayan, R; (2021) A multidimensional measure of polypharmacy for older adults using the Health and Retirement Study. Scientific Reports , 11 , Article 8783. 10.1038/s41598-021-86331-x. Green open access
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Caulfield, MJ; Munroe, PB; O'Neill, D; Witkowska, K; Charchar, FJ; Doblado, M; Evans, S; ... Cheeseman, C; + view all (2008) SLC2A9 is a high-capacity urate transporter in humans. PLoS Medicine , 5 (10) , Article E197. 10.1371/journal.pmed.0050197. Green open access
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Coats, T; Bean, D; Basset, A; Sirkis, T; Brammeld, J; Johnson, S; Thomas, I; ... Dillon, R; + view all (2021) A novel algorithmic approach to generate consensus treatment guidelines in adult acute myeloid leukaemia. British Journal of Haematology 10.1111/bjh.18013. (In press). Green open access
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Coats, Thomas; Bean, Daniel; Vatopoulou, Theodora; Vijayavalli, Dhanapal; El‐Bashir, Razan; Panopoulou, Aikaterini; Wood, Henry; ... Ireland, Robin; + view all (2021) An open‐source, expert‐designed decision tree application to support accurate diagnosis of myeloid malignancies. eJHaem , 2 (2) pp. 261-265. 10.1002/jha2.182. Green open access
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Condominas, E; Sanchez-Niubo, A; Domènech-Abella, J; Haro, JM; Bailon, R; Giné-Vázquez, I; Riquelme, G; ... Siddi, S; + view all (2025) Exploring the dynamic relationships between nocturnal heart rate, sleep disruptions, anxiety levels, and depression severity over time in recurrent major depressive disorder. Journal of Affective Disorders , 376 pp. 139-148. 10.1016/j.jad.2025.02.010. Green open access
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Cummins, Nicholas; Dineley, Judith; Conde, Pauline; Matcham, Faith; Siddi, Sara; Lamers, Femke; Carr, Ewan; ... The RADAR-CNS Consortium; + view all (2023) Multilingual markers of depression in remotely collected speech samples: A preliminary analysis. Journal of Affective Disorders 10.1016/j.jad.2023.08.097. (In press). Green open access
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de Angel, Valeria; Adeleye, Fadekemi; Zhang, Yuezhou; Cummins, Nicholas; Munir, Sara; Lewis, Serena; Laporta Puyal, Estela; ... Hotopf, Matthew; + view all (2023) The Feasibility of Implementing Remote Measurement Technologies in Psychological Treatment for Depression: Mixed Methods Study on Engagement. JMIR Mental Health , 10 , Article e42866. 10.2196/42866. Green open access
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de Jong, S; Newhouse, SJ; Patel, H; Lee, S; Dempster, D; Curtis, C; Paya-Cano, J; ... Breen, G; + view all (2016) Immune signatures and disorder-specific patterns in a cross-disorder gene expression analysis. British Journal of Psychiatry , 209 (3) pp. 202-208. 10.1192/bjp.bp.115.175471. Green open access
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de Lucia, C; Murphy, T; Steves, CJ; Dobson, RJB; Proitsi, P; Thuret, S; (2020) Lifestyle mediates the role of nutrient-sensing pathways in cognitive aging: cellular and epidemiological evidence. Communications Biology , 3 (1) , Article 157. 10.1038/s42003-020-0844-1. Green open access
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De Spiegeleer, A; Bronselaer, A; Teo, JT; Byttebier, G; De Tre, G; Belmans, L; Dobson, R; ... De Spiegeleer, B; + view all (2020) The Effects of ARBs, ACEis, and Statins on Clinical Outcomes of COVID-19 Infection Among Nursing Home Residents. Journal of the American Medical Directors Association , 21 (7) 909-914.e2. 10.1016/j.jamda.2020.06.018. Green open access
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Denaxas, S; Gonzalez-Izquierdo, A; Direk, K; Fitzpatrick, NK; Fatemifar, G; Banerjee, A; Dobson, RJB; ... Hemingway, H; + view all (2019) UK phenomics platform for developing and validating electronic health record phenotypes: CALIBER. Journal of the American Medical Informatics Association , 26 (12) pp. 1545-1559. 10.1093/jamia/ocz105. (In press). Green open access
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Denyer, H; Ramos-Quiroga, JA; Folarin, A; Ramos, C; Nemeth, P; Bilbow, A; Woodward, E; ... Kuntsi, J; + view all (2022) ADHD Remote Technology study of cardiometabolic risk factors and medication adherence (ART-CARMA): a multi-centre prospective cohort study protocol. BMC psychiatry , 22 (1) , Article 813. 10.1186/s12888-022-04429-6. Green open access
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Denyer, Hayley; Deng, Qigang; Adanijo, Abimbola; Asherson, Philip; Bilbow, Andrea; Folarin, Amos; Groom, Madeleine J; ... Simblett, Sara; + view all (2023) Barriers to and Facilitators of Using Remote Measurement Technology in the Long-Term Monitoring of Individuals With ADHD: Interview Study. JMIR Form Res , 7 , Article e44126. 10.2196/44126. Green open access
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Dixon, William G; van der Veer, Sabine N; Ali, Syed Mustafa; Laidlaw, Lynn; Dobson, Richard JB; Sudlow, Cathie; Chico, Tim; ... Doherty, Aiden; + view all (2023) Charting a Course for Smartphones and Wearables to Transform Population Health Research. Journal of Medical Internet Research , 25 , Article e42449. 10.2196/42449. Green open access
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Farajidavar, Nazli; O'Gallagher, Kevin; Bean, Daniel; Nabeebaccus, Adam; Zakeri, Rosita; Bromage, Daniel; Kraljevic, Zeljko; ... Shah, Ajay MM; + view all (2022) Diagnostic signature for heart failure with preserved ejection fraction (HFpEF): a machine learning approach using multi-modality electronic health record data. BMC Cardiovascular Disorders , 22 , Article 567. 10.1186/s12872-022-03005-w. Green open access
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Farran, D; Bean, D; Wang, T; Msosa, Y; Casetta, C; Dobson, R; Teo, JT; ... Gaughran, F; + view all (2022) Anticoagulation for atrial fibrillation in people with serious mental illness in the general hospital setting. Journal of Psychiatric Research , 153 pp. 167-173. 10.1016/j.jpsychires.2022.06.044. Green open access
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Fitzpatrick, Natalie K; Dobson, Richard; Roberts, Angus; Jones, Kerina; Shah, Anoop D; Nenadic, Goran; Ford, Elizabeth; (2023) Understanding Views Around the Creation of a Consented, Donated Databank of Clinical Free Text to Develop and Train Natural Language Processing Models for Research: Focus Group Interviews With Stakeholders. JMIR Medical Informatics , 11 , Article e45534. 10.2196/45534. Green open access
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Fogh, I; Lin, K; Tiloca, C; Rooney, J; Gellera, C; Diekstra, FP; Ratti, A; ... Powell, J; + view all (2016) Association of a Locus in the CAMTA1 Gene With Survival in Patients With Sporadic Amyotrophic Lateral Sclerosis. JAMA Neurology , 73 (7) pp. 812-820. 10.1001/jamaneurol.2016.1114. Green open access
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Fusar-Poli, P; Oliver, D; Spada, G; Patel, R; Stewart, R; Dobson, R; McGuire, P; (2019) Real World Implementation of a Transdiagnostic Risk Calculator for the Automatic Detection of Individuals at Risk of Psychosis in Clinical Routine: Study Protocol. Frontiers in Psychiatry , 10 , Article 109. 10.3389/fpsyt.2019.00109. Green open access
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Garcia-Castro, FJ; Bendayan, R; Dobson, RJB; Blanca, MJ; (2021) Cognition in informal caregivers: evidence from an English population study. Aging & Mental Health 10.1080/13607863.2021.1893270. (In press). Green open access
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Gkotsis, G; Mueller, C; Dobson, RJB; Hubbard, TJP; Dutta, R; (2020) Mining Social Media Data to Study the Consequences of Dementia Diagnosis on Caregivers and Relatives. Dementia and Geriatric Cognitive Disorders , 49 (3) pp. 295-302. 10.1159/000509123. Green open access
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Gkotsis, G; Oellrich, A; Velupillai, S; Liakata, M; Hubbard, TJP; Dobson, RJB; Dutta, R; (2017) Characterisation of mental health conditions in social media using Informed Deep Learning. SCIENTIFIC REPORTS , 7 , Article 45141. 10.1038/srep45141. Green open access
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Green, Rebecca; Lord, Jodie; Xu, Jin; Maddock, Jane; Kim, Min; Dobson, Richard; Legido-Quigley, Cristina; ... Proitsi, Petroula; + view all (2022) Metabolic correlates of late midlife cognitive outcomes: findings from the 1946 British Birth Cohort. Brain Communications , 4 (1) , Article fcab291. 10.1093/braincomms/fcab291. (In press). Green open access
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Hakobyan, S; Harding, K; Aiyaz, M; Hye, A; Dobson, R; Baird, A; Liu, B; ... Morgan, BP; + view all (2016) Complement Biomarkers as Predictors of Disease Progression in Alzheimer's Disease. Journal of Alzheimer's Disease , 54 (2) pp. 707-716. 10.3233/JAD-160420. Green open access
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Handy, A; Lord, J; Green, R; Xu, J; Aarsland, D; Velayudhan, L; Hye, A; ... AddNeuroMed, and the GERAD1 Consortium; + view all (2021) Assessing Genetic Overlap and Causality Between Blood Plasma Proteins and Alzheimer's Disease. Journal of Alzheimer's Disease 10.3233/JAD-210462. (In press). Green open access
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Handy, Alex; Banerjee, Amitava; Wood, Angela M; Dale, Caroline; Sudlow, Cathie LM; Tomlinson, Christopher; Bean, Daniel; ... CVD-COVID-UK Consortium; + view all (2022) Evaluation of antithrombotic use and COVID-19 outcomes in a nationwide atrial fibrillation cohort. Heart 10.1136/heartjnl-2021-320325. (In press). Green open access
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Hemingway, H; Asselbergs, FW; Danesh, J; Dobson, R; Maniadakis, N; Maggioni, A; van Thiel, GJ; ... BigData@Heart Consortium, .; + view all (2018) Big data from electronic health records for early and late translational cardiovascular research: challenges and potential. European Heart Journal , 39 (16) pp. 1481-1495. 10.1093/eurheartj/ehx487. Green open access
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Hepgul, N; Sleeman, KE; Firth, AM; Johnston, A; Teo, JTH; Bernal, W; Dobson, RJB; (2019) In response to Ballantyne and Schaefer's 'Consent and the ethical duty to participate in health data research'. Journal of Medical Ethics , 45 (5) pp. 351-352. 10.1136/medethics-2018-105271. Green open access
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Hong, S; Dobricic, V; Ohlei, O; Bos, I; Vos, SJB; Prokopenko, D; Tijms, BM; ... Bertram, L; + view all (2021) TMEM106B and CPOX are genetic determinants of cerebrospinal fluid Alzheimer's disease biomarker levels. Alzheimer's & Dementia , 17 (10) pp. 1628-1640. 10.1002/alz.12330. Green open access
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Hong, S; Prokopenko, D; Dobricic, V; Kilpert, F; Bos, I; Vos, SJB; Tijms, BM; ... Bertram, L; + view all (2020) Genome-wide association study of Alzheimer's disease CSF biomarkers in the EMIF-AD Multimodal Biomarker Discovery dataset. Translational Psychiatry , 10 , Article 403. 10.1038/s41398-020-01074-z. Green open access
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Hu, J; Lepore, R; Dobson, RJB; Al-Chalabi, A; M Bean, D; Iacoangeli, A; (2021) DGLinker: flexible knowledge-graph prediction of disease-gene associations. Nucleic Acids Research , 49 (W1) W153-W161. 10.1093/nar/gkab449. Green open access
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Hunt, Guy P; Grassi, Luigi; Henkin, Rafael; Smeraldi, Fabrizio; Spargo, Thomas P; Kabiljo, Renata; Koks, Sulev; ... Iacoangeli, Alfredo; + view all (2022) GEOexplorer: a webserver for gene expression analysis and visualisation. Nucleic Acids Research , Article gkac364. 10.1093/nar/gkac364. (In press). Green open access
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Iacoangeli, A; Al Khleifat, A; Jones, AR; Sproviero, W; Shatunov, A; Opie-Martin, S; Morrison, KE; ... Al-Chalabi, A; + view all (2019) C9orf72 intermediate expansions of 24-30 repeats are associated with ALS. Acta Neuropathologica Communications , 7 , Article 115. 10.1186/s40478-019-0724-4. Green open access
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Iacoangeli, A; Al Khleifat, A; Sproviero, W; Shatunov, A; Jones, AR; Morgan, SL; Pittman, A; ... Al-Chalabi, A; + view all (2019) DNAscan: personal computer compatible NGS analysis, annotation and visualisation. BMC Bioinformatics , 20 , Article 213. 10.1186/s12859-019-2791-8. Green open access
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Iacoangeli, A; Al Khleifat, A; Sproviero, W; Shatunov, A; Jones, AR; Opie-Martin, S; Naselli, E; ... Al-Chalabi, A; + view all (2019) ALSgeneScanner: a pipeline for the analysis and interpretation of DNA sequencing data of ALS patients. Amyotrophic Lateral Sclerosis and Frontotemporal Degeneration , 20 (3-4) pp. 207-215. 10.1080/21678421.2018.1562553. Green open access
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Iacoangeli, A; Lin, T; Al Khleifat, A; Jones, AR; Opie-Martin, S; Coleman, JRI; Shatunov, A; ... Al-Chalabi, A; + view all (2020) Genome-wide Meta-analysis Finds the ACSL5-ZDHHC6 Locus Is Associated with ALS and Links Weight Loss to the Disease Genetics. Cell Reports , 33 (4) , Article 108323. 10.1016/j.celrep.2020.108323. Green open access
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Ibrahim, Z; Bean, D; Searle, T; Qian, L; Wu, H; Shek, A; Kraljevic, Z; ... Dobson, RJ; + view all (2021) A Knowledge Distillation Ensemble Framework for Predicting Short and Long-term Hospitalisation Outcomes from Electronic Health Records Data. IEEE Journal of Biomedical and Health Informatics 10.1109/jbhi.2021.3089287. (In press). Green open access
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Ibrahim, ZM; Wu, H; Hamoud, A; Stappen, L; Dobson, RJB; Agarossi, A; (2020) On classifying sepsis heterogeneity in the ICU: insight using machine learning. Journal of the American Medical Informatics Association , 27 (3) pp. 437-443. 10.1093/jamia/ocz211. Green open access
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Iniesta, R; Hodgson, K; Stahl, D; Malki, K; Maier, W; Rietschel, M; Mors, O; ... Uher, R; + view all (2018) Antidepressant drug-specific prediction of depression treatment outcomes from genetic and clinical variables. Scientific Reports , 8 (1) , Article 5530. 10.1038/s41598-018-23584-z. Green open access
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Iniesta, R; Malki, K; Maier, W; Rietschel, M; Mors, O; Hauser, J; Henigsberg, N; ... Uher, R; + view all (2016) Combining clinical variables to optimize prediction of antidepressant treatment outcomes. Journal of Psychiatric Research , 78 pp. 94-102. 10.1016/j.jpsychires.2016.03.016. Green open access
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Iqbal, E; Govind, R; Romero, A; Dzahini, O; Broadbent, M; Stewart, R; Smith, T; ... Ibrahim, ZM; + view all (2020) The side effect profile of Clozapine in real world data of three large mental health hospitals. PLoS One , 15 (12) , Article e0243437. 10.1371/journal.pone.0243437. Green open access
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Iqbal, E; Mallah, R; Rhodes, D; Wu, H; Romero, A; Chang, N; Dzahini, O; ... Ibrahim, ZM; + view all (2017) ADEPt, a semantically-enriched pipeline for extracting adverse drug events from free-text electronic health records. PLoS ONE , 12 (11) 10.1371/journal.pone.0187121. Green open access
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Jackson, R; Kartoglu, I; Stringer, C; Gorrell, G; Roberts, A; Song, X; Wu, H; ... Dobson, R; + view all (2018) CogStack - experiences of deploying integrated information retrieval and extraction services in a large National Health Service Foundation Trust hospital. BMC Medical Informatics and Decision Making , 18 , Article 47. 10.1186/s12911-018-0623-9. Green open access
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Jackson, RG; Patel, R; Jayatilleke, N; Kolliakou, A; Ball, M; Gorrell, G; Roberts, A; ... Stewart, R; + view all (2017) Natural language processing to extract symptoms of severe mental illness from clinical text: the Clinical Record Interactive Search Comprehensive Data Extraction (CRIS-CODE) project. BMJ Open , 6 , Article e012012. 10.1136/bmjopen-2016-012012. Green open access
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Jacobsen, A; Bosch, LJW; Martens-de Kemp, SR; Carvalho, B; Sillars-Hardebol, AH; Dobson, RJ; de Rinaldis, E; ... Feenstra, KA; + view all (2018) Aurora kinase A (AURKA) interaction with Wnt and Ras-MAPK signalling pathways in colorectal cancer. Scientific Reports , 8 , Article 7522. 10.1038/s41598-018-24982-z. Green open access
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Jansen, IE; Savage, JE; Watanabe, K; Bryois, J; Williams, DM; Steinberg, S; Sealock, J; ... Posthuma, D; + view all (2019) Genome-wide meta-analysis identifies new loci and functional pathways influencing Alzheimer's disease risk. Nature Genetics , 51 pp. 404-413. 10.1038/s41588-018-0311-9. Green open access
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Joshi, N; Noor, K; Bai, X; Forbes, M; Ross, T; Barrett, L; Dobson, RJB; ... Lilaonitkul, W; + view all (2025) Automating the extraction of otology symptoms from clinic letters: a methodological study using natural language processing. BMC Medical Informatics and Decision Making , 25 (1) , Article 353. 10.1186/s12911-025-03180-8. Green open access
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Kabiljo, R; Bowles, H; Marriott, H; Jones, AR; Bouton, CR; Dobson, RJB; Quinn, JP; ... Iacoangeli, A; + view all (2022) RetroSnake: A modular pipeline to detect human endogenous retroviruses in genome sequencing data. iScience , 25 (11) , Article 105289. 10.1016/j.isci.2022.105289. Green open access
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Katsoulis, M; Lai, AG; Diaz-Ordaz, K; Gomes, M; Pasea, L; Banerjee, A; Denaxas, S; ... Hemingway, H; + view all (2021) Identifying adults at high-risk for change in weight and BMI in England: a longitudinal, large-scale, population-based cohort study using electronic health records. The Lancet Diabetes and Endocrinology , 9 (10) pp. 681-694. 10.1016/S2213-8587(21)00207-2. Green open access
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Katsoulis, M; Pasea, L; Lai, AG; Dobson, RJB; Denaxas, S; Hemingway, H; Banerjee, A; (2021) Obesity during the COVID-19 pandemic: both cause of high risk and potential effect of lockdown? A population-based electronic health record study. Public Health , 191 pp. 41-47. 10.1016/j.puhe.2020.12.003. Green open access
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Kerz, M; Folarin, A; Meleckyte, R; Watt, FM; Dobson, RJ; Danovi, D; (2016) A Novel Automated High-Content Analysis Workflow Capturing Cell Population Dynamics from Induced Pluripotent Stem Cell Live Imaging Data. Journal of Biomolecular Screening , 21 (9) pp. 887-896. 10.1177/1087057116652064. Green open access
file

Khan, AT; Dobson, RJ; Sattlecker, M; Kiddle, SJ; (2016) Alzheimer's disease: are blood and brain markers related? A systematic review. Ann Clin Transl Neurol , 3 (6) pp. 455-462. 10.1002/acn3.313. Green open access
file

Khondoker, M; Newhouse, S; Westman, E; Muehlboeck, JS; Mecocci, P; Vellas, B; Tsolaki, M; ... Alzheimer's Disease Neuroimaging Initiative; + view all (2015) Linking Genetics of Brain Changes to Alzheimer's Disease: Sparse Whole Genome Association Scan of Regional MRI Volumes in the ADNI and AddNeuroMed Cohorts. Journal of Alzheimer's Disease , 45 (3) pp. 851-864. 10.3233/JAD-142214. Green open access
file

Kiddle, SJ; Voyle, N; Dobson, RJB; (2018) A Blood Test for Alzheimer's Disease: Progress, Challenges, and Recommendations. Journal of Alzheimer's Disease 10.3233/JAD-179904. Green open access
file

Kim, M; Nevado-Holgado, A; Whiley, L; Snowden, SG; Soininen, H; Kloszewska, I; Mecocci, P; ... Legido-Quigley, C; + view all (2017) Association between Plasma Ceramides and Phosphatidylcholines and Hippocampal Brain Volume in Late Onset Alzheimer's Disease. Journal of Alzheimer’s Disease , 60 (3) pp. 809-817. 10.3233/JAD-160645. Green open access
file

Kontaxis, S; Laporta, E; Garcia, E; Guerrero, AI; Zabalza, A; Matteo, M; Lucia, R; ... Comi, G; + view all (2023) Autonomic response to walk tests is useful for assessing outcome measures in people with multiple sclerosis. Frontiers in Physiology , 14 , Article 1145818. 10.3389/fphys.2023.1145818. Green open access
file

Kontaxis, Spyridon; Laporta, Estela; Garcia, Esther; Martinis, Matteo; Leocani, Letizia; Roselli, Lucia; Buron, Mathias Due; ... RADAR, CNS Consortium; + view all (2023) Automatic Assessment of the 2-Minute Walk Distance for Remote Monitoring of People with Multiple Sclerosis. Sensors , 23 (13) , Article 6017. 10.3390/s23136017. Green open access
file

Kovalchuk, Y; Stewart, R; Broadbent, M; Hubbard, TJP; Dobson, RJB; (2017) Analysis of diagnoses extracted from electronic health records in a large mental health case register. PLOS ONE , 12 (2) , Article e0171526.. 10.1371/journal.pone.0171526. Green open access
file

Kraljevic, Z; Bean, D; Shek, A; Bendayan, R; Hemingway, H; Yeung, JA; Deng, A; ... Dobson, RJB; + view all (2024) Foresight—a generative pretrained transformer for modelling of patient timelines using electronic health records: a retrospective modelling study. The Lancet Digital Health , 6 (4) e281-e290. 10.1016/S2589-7500(24)00025-6. Green open access
file

Kraljevic, Z; Searle, T; Shek, A; Roguski, L; Noor, K; Bean, D; Mascio, A; ... Dobson, RJB; + view all (2021) Multi-domain clinical natural language processing with MedCAT: The Medical Concept Annotation Toolkit. Artificial Intelligence in Medicine , 117 , Article 102083. 10.1016/j.artmed.2021.102083. Green open access
file

Kuehne, Carina; Phillips, Matthew D; Moody, Sarah; Bryson, Callum; Campbell, Iain C; Conde, Pauline; Cummins, Nicholas; ... Schmidt, Ulrike; + view all (2024) Correction: Characterising illness stages and recovery trajectories of eating disorders in young people via remote measurement technology (STORY): a multi-centre prospective cohort study protocol. [Corrigendum]. BMC Psychiatry , 24 (1) , Article 624. 10.1186/s12888-024-06039-w. Green open access
file

Kugathasan, P; Wu, H; Gaughran, F; Nielsen, RE; Pritchard, M; Dobson, R; Stewart, R; (2020) Association of physical health multimorbidity with mortality in people with schizophrenia spectrum disorders: Using a novel semantic search system that captures physical diseases in electronic patient records. Schizophrenia Research , 216 pp. 408-415. 10.1016/j.schres.2019.10.061. Green open access
file

Lai, AG; Chang, WH; Parisinos, CA; Katsoulis, M; Blackburn, RM; Shah, AD; Nguyen, V; ... Hemingway, H; + view all (2021) An informatics consult approach for generating clinical evidence for treatment decisions. BMC Medical Informatics and Decision Making , 21 (1) , Article 281. 10.1186/s12911-021-01638-z. Green open access
file

Laiou, Petroula; Biondi, Andrea; Bruno, Elisa; Viana, Pedro F; Winston, Joel S; Rashid, Zulqarnain; Ranjan, Yatharth; ... Richardson, Mark P; + view all (2022) Temporal Evolution of Multiday, Epileptic Functional Networks Prior to Seizure Occurrence. Biomedicines , 10 (10) , Article 2662. 10.3390/biomedicines10102662. Green open access
file

Laiou, Petroula; Kaliukhovich, Dzmitry A; Folarin, Amos A; Ranjan, Yatharth; Rashid, Zulqarnain; Conde, Pauline; Stewart, Callum; ... RADAR-CNS; + view all (2022) The Association Between Home Stay and Symptom Severity in Major Depressive Disorder: Preliminary Findings From a Multicenter Observational Study Using Geolocation Data From Smartphones. JMIR mHealth and uHealth , 10 (1) , Article e28095. 10.2196/28095. Green open access
file

Leirer, DJ; Iyegbe, CO; Di Forti, M; Patel, H; Carra, E; Fraietta, S; Colizzi, M; ... Newhouse, SJ; + view all (2019) Differential gene expression analysis in blood of first episode psychosis patients. Schizophrenia Research , 209 pp. 88-97. 10.1016/j.schres.2019.05.011. Green open access
file

Liu, S; Han, J; Puyal, EL; Kontaxis, S; Sun, S; Locatelli, P; Dineley, J; ... Consortium, R-C; + view all (2022) Fitbeat: COVID-19 estimation based on wristband heart rate using a contrastive convolutional auto-encoder. Pattern Recognit , 123 , Article 108403. 10.1016/j.patcog.2021.108403. Green open access
file

Lord, J; Bradley, J; Green, R; Wong, A; Xu, J; Legido-Quigley, C; Dobson, R; ... Proitsi, P; + view all (2021) Are metabolites linked to midlife cognition on the causal pathway to Alzheimer's Disease? A Mendelian randomization study. Proceedings of the National Academy of Sciences of the United States of America , 118 (16) , Article e2009808118. 10.1073/pnas.2009808118. Green open access
filefile

Lord, J; Jermy, B; Green, R; Wong, A; Xu, J; Legido-Quigley, C; Dobson, R; ... Proitsi, P; + view all (2021) Mendelian randomization identifies blood metabolites previously linked to midlife cognition as causal candidates in Alzheimer's disease. Proceedings of the National Academy of Sciences (PNAS) , 118 (16) , Article e2009808118. 10.1073/pnas.2009808118. Green open access
file

Lunnon, K; Keohane, A; Pidsley, R; Newhouse, S; Riddoch-Contreras, J; Thubron, EB; Devall, M; ... Hodges, A; + view all (2017) Mitochondrial genes are altered in blood early in Alzheimer's disease. Neurobiology of Aging , 53 pp. 36-47. 10.1016/j.neurobiolaging.2016.12.029. Green open access
file

Marriott, H; Kabiljo, R; Al Khleifat, A; Dobson, RJ; Al-Chalabi, A; Iacoangeli, A; (2023) DNAscan2: a versatile, scalable, and user-friendly analysis pipeline for human next-generation sequencing data. Bioinformatics , 39 (4) , Article btad152. 10.1093/bioinformatics/btad152. Green open access
file

Marriott, H; Kabiljo, R; Hunt, GP; Khleifat, AA; Jones, A; Troakes, C; Pfaff, AL; ... Iacoangeli, A; + view all (2023) Unsupervised machine learning identifies distinct ALS molecular subtypes in post-mortem motor cortex and blood expression data. Acta Neuropathologica Communications , 11 , Article 208. 10.1186/s40478-023-01686-8. Green open access
file

Martin, TC; Ilieva, KM; Visconti, A; Beaumont, M; Kiddle, SJ; Dobson, RJB; Mangino, M; ... Karagiannis, SN; + view all (2020) Dysregulated Antibody, Natural Killer Cell and Immune Mediator Profiles in Autoimmune Thyroid Diseases. Cells , 9 (3) , Article 665. 10.3390/cells9030665. Green open access
file

Matcham, F; Carr, E; Meyer, N; White, KM; Oetzmann, C; Leightley, D; Lamers, F; ... Hotopf, M; + view all (2024) The relationship between wearable-derived sleep features and relapse in Major Depressive Disorder. Journal of Affective Disorders , 363 pp. 90-98. 10.1016/j.jad.2024.07.136. Green open access
file

Matcham, F; Carr, E; White, KM; Leightley, D; Lamers, F; Siddi, S; Annas, P; ... RADAR-CNS consortium; + view all (2022) Predictors of engagement with remote sensing technologies for symptom measurement in Major Depressive Disorder. Journal of Affective Disorders , 310 pp. 106-115. 10.1016/j.jad.2022.05.005. Green open access
file

Matcham, Faith; Leightley, Daniel; Siddi, Sara; Lamers, Femke; White, Katie M; Annas, Peter; de Girolamo, Giovanni; ... Hotopf, Matthew; + view all (2022) Remote Assessment of Disease and Relapse in Major Depressive Disorder (RADAR-MDD): recruitment, retention, and data availability in a longitudinal remote measurement study. BMC Psychiatry , 22 , Article 136. 10.1186/s12888-022-03753-1. Green open access
file

Matcham, F; Barattieri di San Pietro, C; Bulgari, V; de Girolamo, G; Dobson, R; Eriksson, H; Folarin, AA; ... RADAR-CNS consortium; + view all (2019) Remote assessment of disease and relapse in major depressive disorder (RADAR-MDD): a multi-centre prospective cohort study protocol. BMC Psychiatry , 19 (1) , Article 72. 10.1186/s12888-019-2049-z. Green open access
file

Meyer, N; Kerz, M; Folarin, A; Joyce, DW; Jackson, R; Karr, C; Dobson, R; (2018) Capturing Rest-Activity Profiles in Schizophrenia Using Wearable and Mobile Technologies: Development, Implementation, Feasibility, and Acceptability of a Remote Monitoring Platform. JMIR MHEALTH AND UHEALTH , 6 (10) , Article e188. 10.2196/mhealth.8292. Green open access
file

Mirza, L; Das-Munshi, J; Chaturvedi, J; Wu, H; Kraljewic, Z; Searle, T; Shaari, S; ... Bendayan, R; + view all (2021) Investigating the Association between Physical Health Comorbidities and Disability in Individuals with Severe Mental Illness. European Psychiatry 10.1192/j.eurpsy.2021.2255. (In press). Green open access
file

Mitratza, M; Goodale, BM; Shagadatova, A; Kovacevic, V; van de Wijgert, J; Brakenhoff, TB; Dobson, R; ... Downward, GS; + view all (2022) The performance of wearable sensors in the detection of SARS-CoV-2 infection: a systematic review. The Lancet Digital Health , 4 (5) e370-e383. 10.1016/S2589-7500(22)00019-X. Green open access
file

Msosa, YJ; Grauslys, A; Zhou, Y; Wang, T; Buchan, I; Langan, P; Foster, S; ... Kehoe, D; + view all (2023) Trustworthy Data and AI Environments for Clinical Prediction: Application to Crisis-Risk in People With Depression. IEEE Journal of Biomedical and Health Informatics , 27 (11) pp. 5588-5598. 10.1109/JBHI.2023.3312011. Green open access
file

Newhouse, S; Farrall, M; Wallace, C; Hoti, M; Burke, B; Howard, P; Onipinla, A; ... Munroe, PB; + view all (2009) Polymorphisms in the WNK1 Gene Are Associated with Blood Pressure Variation and Urinary Potassium Excretion. PLOS ONE , 4 (4) , Article e5003. 10.1371/journal.pone.0005003. Green open access
file

Newhouse, S; Farrall, M; Wallace, C; Hoti, M; Burke, B; Howard, P; Onipinla, A; ... Munroe, PB; + view all (2009) Polymorphisms in the WNK1 gene are asociated with blood pressure variation and urinary potassium excretion. PLoS ONE , 4 (4) , Article e5003. 10.1371/journal.pone.0005003. Green open access
file

Noor, Kawsar; Roguski, Lukasz; Bai, Xi; Handy, Alex; Klapaukh, Roman; Folarin, Amos; Romao, Luis; ... Dobson, Richard Jb; + view all (2022) Deployment of a Free-Text Analytics Platform at a UK National Health Service Research Hospital: CogStack at University College London Hospitals. JMIR Med Inform , 10 (8) , Article e38122. 10.2196/38122. Green open access
file

O'Gallagher, K; Shek, A; Bean, DM; Bendayan, R; Papachristidis, A; Teo, JTH; Dobson, RJB; ... Zakeri, R; + view all (2021) Pre-existing cardiovascular disease rather than cardiovascular risk factors drives mortality in COVID-19. BMC Cardiovascular Disorders , 21 (1) , Article 327. 10.1186/s12872-021-02137-9. Green open access
file

Oliver, D; Spada, G; Colling, C; Broadbent, M; Baldwin, H; Patel, R; Stewart, R; ... Fusar-Poli, P; + view all (2020) Real-world implementation of precision psychiatry: Transdiagnostic risk calculator for the automatic detection of individuals at-risk of psychosis. Schizophrenia Research 10.1016/j.schres.2020.05.007. (In press). Green open access
file

Papez, V; Moinat, M; Payralbe, S; Asselbergs, FW; Lumbers, RT; Hemingway, H; Dobson, R; (2021) Transforming and evaluating electronic health record disease phenotyping algorithms using the OMOP common data model: a case study in heart failure. JAMIA Open , Article ooab001. 10.1093/jamiaopen/ooab001. Green open access
file

Pasea, L; Chung, S-C; Pujades-Rodriguez, M; Shah, AD; Alvarez-Madrazo, S; Allan, V; Teo, JT; ... Hemingway, H; + view all (2019) Bleeding in cardiac patients prescribed antithrombotic drugs: electronic health record phenotyping algorithms, incidence, trends and prognosis. BMC Medicine , 17 , Article 206. 10.1186/s12916-019-1438-y. Green open access
file

Patel, Dipen; Msosa, Yamiko J; Wang, Tao; Mustafa, Omar G; Gee, Siobhan; Williams, Julie; Roberts, Angus; ... Gaughran, Fiona; + view all (2022) An implementation framework and a feasibility evaluation of a clinical decision support system for diabetes management in secondary mental healthcare using CogStack. BMC Medical Informatics and Decision Making , 22 , Article 100. 10.1186/s12911-022-01842-5. Green open access
file

Patel, H; Lee, SH; Breen, G; Menzel, S; Ojewunmi, O; Dobson, RJB; (2022) The COPILOT Raw Illumina Genotyping QC Protocol. Current Protocols , 2 (4) , Article e373. 10.1002/cpz1.373. Green open access
file

Patel, H; Ashton, NJ; Dobson, RJB; Andersson, L-M; Yilmaz, A; Blennow, K; Gisslen, M; (2021) Proteomic blood profiling in mild, severe and critical COVID-19 patients. Scientific Reports , 11 , Article 6357. 10.1038/s41598-021-85877-0. Green open access
file

Patel, H; Dobson, RJB; Newhouse, SJ; (2019) A Meta-Analysis of Alzheimer’s Disease Brain Transcriptomic Data. Journal of Alzheimer's Disease , 68 (4) pp. 1635-1656. 10.3233/JAD-181085. Green open access
file

Patel, H; Hodges, AK; Curtis, C; Lee, SH; Troakes, C; Dobson, RJB; Newhouse, SJ; (2019) Transcriptomic analysis of probable asymptomatic and symptomatic alzheimer brains. Brain, Behavior, and Immunity , 80 pp. 644-656. 10.1016/j.bbi.2019.05.009. Green open access
file

Patel, H; Iniesta, R; Stahl, D; Dobson, RJB; Newhouse, SJ; (2020) Working Towards a Blood-Derived Gene Expression Biomarker Specific for Alzheimer's Disease. Journal of Alzheimer's Disease, 10.3233/JAD-191163. (In press). Green open access
file

Polhemus, AM; Novák, J; Ferrao, J; Simblett, S; Radaelli, M; Locatelli, P; Matcham, F; ... Hotopf, M; + view all (2020) Human-Centered Design Strategies for Device Selection in mHealth Programs: Development of a Novel Framework and Case Study. JMIR mHealth uHealth , 8 (5) , Article e16043. 10.2196/16043. Green open access
file

Postiglione, Marco; Bean, Daniel; Kraljevic, Zeljko; Dobson, Richard JB; Moscato, Vincenzo; (2024) Predicting Future Disorders via Temporal Knowledge Graphs and Medical Ontologies. IEEE Journal of Biomedical and Health Informatics pp. 1-12. 10.1109/JBHI.2024.3390419. (In press). Green open access
file

Proitsi, P; Kim, M; Whiley, L; Simmons, A; Sattlecker, M; Velayudhan, L; Lupton, MK; ... Legido-Quigley, C; + view all (2017) Association of blood lipids with Alzheimer's disease: A comprehensive lipidomics analysis. Alzheimer's & Dementia , 13 (2) pp. 140-151. 10.1016/j.jalz.2016.08.003. Green open access
file

Qian, L; Raj, JA; Logan-Ellis, H; Zhang, A; Zhang, Y; Wang, T; Dobson, RJ; (2025) CSAI: Conditional Self-Attention Imputation for Healthcare Time-series. IEEE Journal of Biomedical and Health Informatics , PP 10.1109/JBHI.2025.3648181. (In press). Green open access
file

Ranjan, Y; Althobiani, M; Jacob, J; Orini, M; Dobson, R; Porter, J; Hurst, J; (2021) Issue in Remote Assessment of Lung Disease and Impact on Physical and Mental Health (RALPMH): Protocol for Prospective Observational Study. JMIR Research Protocols 10.2196/28873. (In press). Green open access
file

Ranjan, Y; Rashid, Z; Stewart, C; Conde, P; Begale, M; Verbeeck, D; Boettcher, S; ... RADAR-CNS Consortium, .; + view all (2019) RADAR-Base: Open Source Mobile Health Platform for Collecting, Monitoring, and Analyzing Data Using Sensors, Wearables, and Mobile Devices. JMIR mHealth uHealth , 7 (8) , Article e11734. 10.2196/11734. Green open access
file

Russ, TC; Woelbert, E; Davis, KAS; Hafferty, JD; Ibrahim, Z; Inkster, B; John, A; ... Zammit, S; + view all (2019) How data science can advance mental health research. Nature Human Behaviour , 3 pp. 24-32. 10.1038/s41562-018-0470-9. Green open access
file

Sankesara, Heet; Denyer, Hayley; Sun, Shaoxiong; Deng, Qigang; Ranjan, Yatharth; Conde, Pauline; Rashid, Zulqarnain; ... Kuntsi, Jonna; + view all (2025) Identifying Digital Markers of Attention-Deficit/Hyperactivity Disorder (ADHD) in a Remote Monitoring Setting: Prospective Observational Study. JMIR Formative Research , 9 , Article e54531. 10.2196/54531. Green open access
file

Sattlecker, M; Khondoker, M; Proitsi, P; Williams, S; Soininen, H; Kłoszewska, I; Mecocci, P; ... Dobson, RJ; + view all (2015) Longitudinal Protein Changes in Blood Plasma Associated with the Rate of Cognitive Decline in Alzheimer's Disease. Journal of Alzheimer's Disease , 49 (4) pp. 1105-1114. 10.3233/JAD-140669. Green open access
filefile

Searle, T; Ibrahim, Z; Teo, J; Dobson, R; (2021) Estimating redundancy in clinical text. Journal of Biomedical Informatics , 124 , Article 103938. 10.1016/j.jbi.2021.103938. Green open access
file

Searle, Thomas; Ibrahim, Zina; Teo, James; Dobson, Richard JB; (2023) Discharge summary hospital course summarisation of in patient Electronic Health Record text with clinical concept guided deep pre-trained Transformer models. Journal of Biomedical Informatics , 141 , Article 104358. 10.1016/j.jbi.2023.104358. Green open access
file

Shah, AD; Bailey, E; Williams, T; Denaxas, S; Dobson, R; Hemingway, H; (2019) Natural language processing for disease phenotyping in UK primary care records for research: a pilot study in myocardial infarction and death. Journal of Biomedical Semantics , 10 , Article 20. 10.1186/s13326-019-0214-4. Green open access
file

Shi, L; Winchester, LM; Liu, BY; Killick, R; Ribe, EM; Westwood, S; Baird, AL; ... Lovestone, S; + view all (2020) Dickkopf-1 Overexpression in vitro Nominates Candidate Blood Biomarkers Relating to Alzheimer's Disease Pathology. Journal of Alzheimer's Disease , 77 (3) pp. 1353-1368. 10.3233/JAD-200208. Green open access
file

Shi, L; Baird, AL; Westwood, S; Hye, A; Dobson, R; Thambisetty, M; Lovestone, S; (2018) A Decade of Blood Biomarkers for Alzheimer's Disease Research: An Evolving Field, Improving Study Designs, and the Challenge of Replication. [Review]. Journal of Alzheimer's Disease , 62 (3) pp. 1181-1198. 10.3233/JAD-170531. Green open access
file

Siddi, S; Bailon, R; Giné-Vázquez, I; Matcham, F; Lamers, F; Kontaxis, S; Laporta, E; ... RADAR-CNS consortium; + view all (2023) The usability of daytime and night-time heart rate dynamics as digital biomarkers of depression severity. Psychological Medicine , 53 (8) pp. 3249-3260. 10.1017/S0033291723001034. Green open access
file

Snoeijer, BT; Burger, M; Sun, S; Dobson, RJB; Folarin, AA; (2021) Measuring the effect of Non-Pharmaceutical Interventions (NPIs) on mobility during the COVID-19 pandemic using global mobility data. npj Digital Medicine , 4 (1) , Article 81. 10.1038/s41746-021-00451-2. Green open access
file

Stewart, C; Ranjan, Y; Conde, P; Rashid, Z; Sangkesara, H; Bai, X; Dobson, R; (2021) Investigating the Use of Digital Health Technology to Monitor COVID-19 and Its Effects: Protocol for an Observational Study (Covid Collab Study). JMIR Research Protocols , 10 (12) , Article e32587. 10.2196/32587. Green open access
file

Sun, S; Folarin, AA; Zhang, Y; Cummins, N; Liu, S; Stewart, C; Ranjan, Y; ... Dobson, RJ; + view all (2022) The utility of wearable devices in assessing ambulatory impairments of people with multiple sclerosis in free-living conditions. Computer Methods and Programs in Biomedicine , 227 , Article 107204. 10.1016/j.cmpb.2022.107204. Green open access
file

Sun, Shaoxiong; Denyer, Hayley; Sankesara, Heet; Deng, Qigang; Ranjan, Yatharth; Conde, Pauline; Rashid, Zulqarnain; ... Kuntsi, Jonna; + view all (2023) Remote Administration of ADHD-Sensitive Cognitive Tasks: A Pilot Study. Journal of Attention Disorders , 27 (9) pp. 1040-1050. 10.1177/10870547231172763. Green open access
file

Sun, Shaoxiong; Folarin, Amos A; Zhang, Yuezhou; Cummins, Nicholas; Garcia-Dias, Rafael; Stewart, Callum; Ranjan, Yatharth; ... RADAR-CNS, Consortium; + view all (2023) Challenges in Using mHealth Data From Smartphones and Wearable Devices to Predict Depression Symptom Severity: Retrospective Analysis. Journal of Medical Internet Research , 25 , Article e45233. 10.2196/45233. Green open access
file

Sun, S; Folarin, AA; Ranjan, Y; Rashid, Z; Conde, P; Stewart, C; Cummins, N; ... Dobson, RJ; + view all (2020) Using smartphones and wearable devices to monitor behavioural changes during COVID-19. Journal of Medical Internet Research , 22 (9) , Article e19992. 10.2196/19992. Green open access
file

Taylor, Kurt; Eastwood, Sophie; Walker, Venexia; Cezard, Genevieve; Knight, Rochelle; Al Arab, Marwa; Wei, Yinghui; ... Denholm, Rachel; + view all (2024) Incidence of diabetes after SARS-CoV-2 infection in England and the implications of COVID-19 vaccination: a retrospective cohort study of 16 million people. The Lancet Diabetes & Endocrinology , 12 (8) pp. 558-568. 10.1016/S2213-8587(24)00159-1. Green open access
file

Teo, JTH; Dinu, V; Bernal, W; Davidson, P; Oliynyk, V; Breen, C; Barker, RD; (2021) Real-time clinician text feeds from electronic health records. npj Digital Medicine , 4 (1) , Article 35. 10.1038/s41746-021-00406-7. Green open access
file

Tissot, H; Dobson, R; (2019) Combining string and phonetic similarity matching to identify misspelt names of drugs in medical records written in Portuguese. Journal of Biomedical Semantics , 10 (Suppl 1) , Article 17. 10.1186/s13326-019-0216-2. Green open access
file

Tissot, HC; Shah, AD; Brealey, D; Harris, S; Agbakoba, R; Folarin, A; Romao, L; ... Asselbergs, FW; + view all (2020) Natural language processing for mimicking clinical trial recruitment in critical care: a semi-automated simulation based on the LeoPARDS trial. IEEE Journal of Biomedical and Health Informatics 10.1109/JBHI.2020.2977925. (In press). Green open access
file

Traylor, M; Curtis, C; Patel, H; Breen, G; Hyuck Lee, S; Xu, X; Newhouse, S; ... Scott, IC; + view all (2017) Genetic and environmental risk factors for rheumatoid arthritis in a UK African ancestry population: the GENRA case-control study. Rheumatology , 56 (8) pp. 1282-1292. 10.1093/rheumatology/kex048. Green open access
file

Voyle, N; Patel, H; Folarin, A; Newhouse, S; Johnston, C; Visser, PJ; Dobson, RJB; (2017) Genetic Risk as a Marker of Amyloid-β and Tau Burden in Cerebrospinal Fluid. Journal of Alzheimer's Disease , 55 (4) pp. 1417-1427. 10.3233/JAD-160707. Green open access
file

Wang, T; Bendayan, R; Msosa, Y; Pritchard, M; Roberts, A; Stewart, R; Dobson, R; (2022) Patient-centric characterization of multimorbidity trajectories in patients with severe mental illnesses: A temporal bipartite network modeling approach. Journal of Biomedical Informatics , 127 , Article 104010. 10.1016/j.jbi.2022.104010. Green open access
file

Wang, Tao; Codling, David; Bhugra, Dinesh; Msosa, Yamiko; Broadbent, Matthew; Patel, Rashmi; Roberts, Angus; ... Harland, Robert; + view all (2023) Unraveling ethnic disparities in antipsychotic prescribing among patients with psychosis: A retrospective cohort study based on electronic clinical records. Schizophrenia Research , 260 pp. 168-179. 10.1016/j.schres.2023.08.024. Green open access
file

Wang, T; Oliver, D; Msosa, Y; Colling, C; Spada, G; Roguski, Ł; Folarin, A; ... Fusar-Poli, P; + view all (2020) Implementation of a Real-Time Psychosis Risk Detection and Alerting System Based on Electronic Health Records using CogStack. Journal of Visualized Experiments , 159 , Article e60794. 10.3791/60794. Green open access
file

Wickstrøm, KE; Vitelli, V; Carr, E; Holten, AR; Bendayan, R; Reiner, AH; Bean, D; ... Amundsen, EK; + view all (2021) Regional performance variation in external validation of four prediction models for severity of COVID-19 at hospital admission: An observational multi-centre cohort study. PLoS ONE , 16 (8) , Article e0255748. 10.1371/journal.pone.0255748. Green open access
file

Wightman, DP; Jansen, IE; Savage, JE; Shadrin, AA; Bahrami, S; Holland, D; Rongve, A; ... Posthuma, D; + view all (2021) A genome-wide association study with 1,126,563 individuals identifies new risk loci for Alzheimer's disease. Nature Genetics , 53 (9) pp. 1276-1282. 10.1038/s41588-021-00921-z. Green open access
file

Wu, Honghan; Wang, Minhong; Wu, Jinge; Francis, Farah; Chang, Yun-Hsuan; Shavick, Alex; Dong, Hang; ... Dobson, Richard JB; + view all (2022) A survey on clinical natural language processing in the United Kingdom from 2007 to 2022. npj Digital Medicine , 5 , Article 186. 10.1038/s41746-022-00730-6. Green open access
file

Wu, H; Hodgson, K; Dyson, S; Morley, KI; Ibrahim, ZM; Iqbal, E; Stewart, R; ... Sudlow, C; + view all (2019) Efficiently Reusing Natural Language Processing Models for Phenotype Identification in Free-text Electronic Medical Records: Methodological Study. JMIR Medical Informatics , 7 (4) , Article e14782. 10.2196/14782. Green open access
file

Wu, H; Oellrich, A; Girges, C; de Bono, B; Hubbard, TJP; Dobson, RJB; (2017) Automated PDF highlighting to support faster curation of literature for Parkinson's and Alzheimer's disease. Database , 2017 (1) , Article bax027. 10.1093/database/bax027. Green open access
file

Wu, H; Toti, G; Morley, KI; Ibrahim, ZM; Folarin, A; Jackson, R; Kartoglu, I; ... Dobson, RJB; + view all (2018) SemEHR: A general-purpose semantic search system to surface semantic data from clinical notes for tailored care, trial recruitment, and clinical research. JAMIA - Journal of the American Medical Informatics Association 10.1093/jamia/ocx160. (In press). Green open access
file

Wu, H; Zhang, H; Karwath, A; Ibrahim, Z; Shi, T; Zhang, X; Wang, K; ... Guthrie, B; + view all (2020) Ensemble learning for poor prognosis predictions: a case study on SARS-CoV2. Journal of the American Medical Informatics Association 10.1093/jamia/ocaa295. (In press). Green open access
file

Xu, J; Bankov, G; Kim, M; Wretlind, A; Lord, J; Green, R; Hodges, A; ... Legido-Quigley, C; + view all (2020) Integrated lipidomics and proteomics network analysis highlights lipid and immunity pathways associated with Alzheimer's disease. Translational Neurodegeneration , 9 , Article 36. 10.1186/s40035-020-00215-0. Green open access
file

Zakeri, R; Bendayan, R; Ashworth, M; Bean, DM; Dodhia, H; Durbaba, S; O'Gallagher, K; ... Shah, AM; + view all (2020) A case-control and cohort study to determine the relationship between ethnic background and severe COVID-19. EClinicalMedicine , 28 , Article 100574. 10.1016/j.eclinm.2020.100574. Green open access
file

Zakeri, R; Pickles, A; Carr, E; Bean, DM; O'Gallagher, K; Kraljewic, Z; Searle, T; ... Bendayan, R; + view all (2021) Biological responses to COVID-19: Insights from physiological and blood biomarker profiles. Current Research in Translational Medicine , 69 (2) , Article 103276. 10.1016/j.retram.2021.103276. Green open access
file

Zhang, Yuezhou; Folarin, Amos A; Sun, Shaoxiong; Cummins, Nicholas; Vairavan, Srinivasan; Bendayan, Rebecca; Ranjan, Yatharth; ... RADAR-CNS consortium; + view all (2022) Longitudinal Relationships Between Depressive Symptom Severity and Phone-Measured Mobility: Dynamic Structural Equation Modeling Study. JMIR Mental Health , 9 (3) , Article e34898. 10.2196/34898. Green open access
file

Zhang, Yuezhou; Folarin, Amos A; Sun, Shaoxiong; Cummins, Nicholas; Vairavan, Srinivasan; Qian, Linglong; Ranjan, Yatharth; ... RADAR-CNS Consortium; + view all (2022) Associations Between Depression Symptom Severity and Daily-Life Gait Characteristics Derived From Long-Term Acceleration Signals in Real-World Settings: Retrospective Analysis. JMIR mHealth and uHealth , 10 (10) , Article e40667. 10.2196/40667. Green open access
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Zhang, Yuezhou; Pratap, Abhishek; Folarin, Amos A; Sun, Shaoxiong; Cummins, Nicholas; Matcham, Faith; Vairavan, Srinivasan; ... RADAR-CNS consortium; + view all (2023) Long-term participant retention and engagement patterns in an app and wearable-based multinational remote digital depression study. NPJ Digit Med , 6 (1) , Article 25. 10.1038/s41746-023-00749-3. Green open access
file

Zhang, Y; Folarin, AA; Sun, S; Cummins, N; Bendayan, R; Ranjan, Y; Rashid, Z; ... RADAR-CNS Consortium; + view all (2021) Relationship Between Major Depression Symptom Severity and Sleep Collected Using a Wristband Wearable Device: Multicenter Longitudinal Observational Study. JMIR Mhealth Uhealth , 9 (4) , Article e24604. 10.2196/24604. Green open access
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Zhang, Y; Folarin, AA; Sun, S; Cummins, N; Ranjan, Y; Rashid, Z; Conde, P; ... Dobson, RJB; + view all (2021) Predicting Depressive Symptom Severity Through Individuals' Nearby Bluetooth Device Count Data Collected by Mobile Phones: Preliminary Longitudinal Study. JMIR mHealth and uHealth , 9 (7) , Article e29840. 10.2196/29840. Green open access
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Proceedings paper

Campbell, Edward L; Dineley, Judith; Conde, Pauline; Matcham, Faith; White, Katie M; Oetzmann, Carolin; Simblett, Sara; ... Cummins, Nicholas; + view all (2023) Classifying depression symptom severity: Assessment of speech representations in personalized and generalized machine learning models. In: Procceedings of the International Speech Communication Association. (pp. pp. 1738-1742). ISCA: Dublin, Ireland. Green open access
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Denaxas, S; Stenetorp, P; Riedel, S; Pikoula, M; Dobson, R; Hemingway, H; (2018) Application of Clinical Concept Embeddings for Heart Failure Prediction in UK EHR data. In: Proceedings of the 32nd Conference on Neural Information Processing Systems (NIPS 2018). : Montréal, Canada. Green open access
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Deng, Y; Wen, Y; Qian, L; Puyol Anton, E; Xu, H; Pushparajah, K; Ibrahim, Z; ... Young, A; + view all (2023) Multi-modal Latent-Space Self-alignment for Super-Resolution Cardiac MR Segmentation. In: Camara, O and Puyol-Anton, E and Qin, C and Sermesant, M and Suinesiaputra, A and Wang, S and Young, A, (eds.) Statistical Atlases and Computational Models of the Heart. Regular and CMRxMotion Challenge Papers. (pp. pp. 26-35). Springer: Cham, Switzerland. Green open access
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Dineley, J; Carr, E; Matcham, F; Downs, J; Dobson, R; Quatieri, TF; Cummins, N; (2023) Towards robust paralinguistic assessment for real-world mobile health (mHealth) monitoring: an initial study of reverberation effects on speech. In: Proceedings of the Annual Conference of the International Speech Communication Association, INTERSPEECH. (pp. pp. 2373-2377). ISCA Green open access
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Dineley, J; Lavelle, G; Leightley, D; Matcham, F; Siddi, S; Peñarrubia-María, MT; White, KM; ... Cummins, N; + view all (2021) Remote smartphone-based speech collection: Acceptance and barriers in individuals with major depressive disorder. In: Proceedings of Interspeech 2021. (pp. pp. 631-635). International Speech Communication Association (ISCA): Brno, Czechia. Green open access
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Dineley, Judith; Carr, Ewan; White, Lauren L; Lucas, Catriona; Rahman, Zahia; Pan, Tian; Matcham, Faith; ... Cummins, Nicholas; + view all (2024) Variability of speech timing features across repeated recordings: a comparison of open-source extraction techniques. In: Interspeech 2024. (pp. pp. 2015-2019). ISCA: Kos, Greece. Green open access
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Gracia, SP; Siddi, S; Cummins, N; Vairavan, S; Matcham, F; Haro, JM; Hotopf, M; ... Yebra, AM; + view all (2024) Assessment of heart rate circadianity alterations in patients with depression using a wearable device. In: 2024 13th Conference of the European Study Group on Cardiovascular Oscillations: Physiologically-Guided Signal Processing of Cardiovascular and Cerebrovascular Oscillations, ESGCO 2024. (pp. pp. 1-2). IEEE: Zaragoza, Spain. Green open access
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Ibrahim, Z; Wu, H; Bach, K; Dobson, R; Denaxas, S; Wiratunga, N; Massie, S; (2017) Preface: The 2nd International Workshop on Knowledge Discovery in Healthcare Data (KDH). In: Ibrahim, Z and Wu, H and Bach, K and Dobson, R and Denaxas, S and Wiratunga, N and Massie, S and Sani, S, (eds.) KDH@IJCAI 2017: Knowledge Discovery in Healthcare Data: Proceedings of the 2nd International Workshop on Knowledge Discovery in Healthcare Data Co-located with the 26th International Joint Conference on Artificial Intelligence (IJCAI 2017). (pp. pp. 3-4). CEUR Workshop Proceedings: Melbourne, Australia. Green open access
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Ibrahim, Z; Wu, H; Dobson, R; (2020) Modeling rare interactions in time series data through qualitative change: Application to outcome prediction in intensive care units. In: Frontiers in Artificial Intelligence and Applications. (pp. pp. 1826-1833). IOS Press Green open access
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Kerz, M; Folarin, A; Meyer, N; Begale, M; MacCabe, J; Dobson, RJ; (2016) SleepSight: A wearables-based relapse prevention system for Schizophrenia. In: Lukowicz, P and Krüger, A and Bulling, A and Lim, YK and Patel, SN, (eds.) UbiComp '16: Proceedings of the 2016 ACM International Joint Conference on Pervasive and Ubiquitous Computing: Adjunct. (pp. pp. 113-116). Association for Computing Machinery (ACM): New York, NY, USA. Green open access
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Kraljevic, Z; Shek, A; Yeung, JA; Sheldon, EJ; Shuaib, H; Al-Agil, M; Bai, X; ... Teo, J; + view all (2023) Validating Transformers for Redaction of Text from Electronic Health Records in Real-World Healthcare. In: Proceedings - 2023 IEEE 11th International Conference on Healthcare Informatics, ICHI 2023. (pp. pp. 544-549). IEEE: Houston, TX, USA. Green open access
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Ormandy, C; Ibrahim, ZM; Dobson, RJB; (2017) Learning patient similarity using joint distributed embeddings of treatment and diagnoses. In: Ibrahim, ZM and Wu, H and Bach, K and Dobson, R and Denaxas, S and Wiratunga, N and Massie, S and Sani, S, (eds.) KDH@IJCAI 2017: Knowledge Discovery in Healthcare Data: Proceedings of the 2nd International Workshop on Knowledge Discovery in Healthcare Data Co-located with the 26th International Joint Conference on Artificial Intelligence (IJCAI 2017). (pp. pp. 30-35). CEUR Workshop Proceedings: Melbourne, Australia. Green open access
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Pandey, C; Ibrahim, Z; Wu, H; Iqbal, E; Dobson, R; (2017) Improving RNN with atention and embedding for adverse drug reactions. In: Proceedings of the 2017 International Conference on Digital Health: DH 17. (pp. pp. 67-71). ACM: London, United Kingdom. Green open access
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Pérez-Toro, PA; Dineley, J; Kaczkowska, A; Conde, P; Zhang, Y; Matcham, F; Siddi, S; ... Cummins, N; + view all (2024) Longitudinal Modeling of Depression Shifts Using Speech and Language. In: ICASSP 2024 - 2024 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP). (pp. pp. 12021-12025). IEEE: Seoul, Korea, Republic of. Green open access
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Qian, L; Ibrahim, Z; Zhang, A; Dobson, RJB; (2023) Addressing Class Imbalance in Electronic Health Records Data Imputation. In: Proceedings of the 6th International Workshop on Knowledge Discovery From Healthcare Data. CEUR Workshop Proceedings Green open access
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Ranjan, Y; Folarin, AA; Stewart, C; Conde, P; Dobson, R; Rashid, Z; (2019) Challenges & solutions in a hybrid mHealth mobile app. In: Proceedings of the 2019 ACM International Joint Conference on Pervasive and Ubiquitous Computing and Proceedings of the 2019 ACM International Symposium on Wearable Computers. (pp. pp. 183-186). ACM Green open access
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Ranjan, Y; Kerz, M; Rashid, Z; Boettcher, S; Dobson, RJB; Folarin, AA; (2018) RADAR-base: A Novel Open Source m-Health Platform. In: Proceedings of the 2018 ACM International Joint Conference and 2018 International Symposium on Pervasive and Ubiquitous Computing and Wearable Computers. (pp. pp. 223-226). ACM: New York (NY), USA. Green open access
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Rashid, Z; Stewart, CL; Boettcher, S; Ranjan, Y; Dobson, RJB; Folarin, AA; (2018) RADAR-base: Epilepsy Case Study. In: Proceedings of the 2018 ACM International Joint Conference on Pervasive and Ubiquitous Computing and Proceedings of the 2018 ACM International Symposium on Wearable Computers (Ubicomp/iswc'18 Adjunct). (pp. pp. 227-230). ACM Green open access
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Searle, T; Ibrahim, Z; Dobson, R; (2020) Comparing natural language processing techniques for Alzheimer's dementia prediction in spontaneous speech. In: (Proceedings) INTERSPEECH 2020. (pp. pp. 2192-2196). International Speech Communication Association Green open access
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Searle, T; Ibrahim, Z; Dobson, RJB; (2020) Experimental Evaluation and Development of a Silver-Standard for the MIMIC-III Clinical Coding Dataset. In: Proceedings of the 19th SIGBioMed Workshop on Biomedical Language Processing. (pp. pp. 76-85). Association for Computational Linguistics (ACL): Online. Green open access
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Searle, T; Kraljevic, Z; Bendayan, R; Bean, D; Dobson, R; (2020) MedCATTrainer: A biomedical free text annotation interface with active learning and research use case specific customisation. In: Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing (EMNLP-IJCNLP): System Demonstrations. (pp. pp. 139-144). Association for Computational Linguistics: Hong Kong, China. Green open access
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Stewart, CL; Rashid, Z; Ranjan, Y; Sun, S; Dobson, RJB; Folarin, AA; (2018) RADAR-base: Major Depressive Disorder and Epilepsy Case Studies. In: Proceedings of the 2018 ACM International Joint Conference and 2018 International Symposium on Pervasive and Ubiquitous Computing and Wearable Computers. (pp. pp. 1735-1743). ACM Green open access
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Wang, H; Sun, Q; Oellrich, A; Wu, H; Dobson, R; (2017) The psycho-env corpus: research articles annotated for knowledge discovery on correlating mental diseases and environmental factors. In: Ibrahim, ZM and Wu, H and Bach, K and Dobson, R and Denaxas, S and Wiratunga, N and Massie, S and Sani, S, (eds.) KDH@IJCAI 2017: Knowledge Discovery in Healthcare Data: Proceedings of the 2nd International Workshop on Knowledge Discovery in Healthcare Data Co-located with the 26th International Joint Conference on Artificial Intelligence (IJCAI 2017). (pp. pp. 36-40). CEUR Workshop Proceedings: Melbourne, Australia. Green open access
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White, Lauren; Carr, Ewan; Dineley, Judith; Botelho, Catarina; Conde, Pauline; Matcham, Faith; Oetzmann, Carolin; ... Cummins, Nicholas; + view all (2025) Speech Reference Intervals: An Assessment of Feasibility in Depression Symptom Severity Prediction. In: Interspeech 2025. (pp. pp. 459-463). ISCA Green open access
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Wiratunga, N; Corsar, D; Martin, K; Wijekoon, A; Elyan, E; Cooper, K; Ibrahim, Z; ... Chaudhuri, R; + view all (2019) Learning to self-manage by intelligent monitoring, prediction and intervention. In: CEUR Workshop Proceedings of 4th International Workshop on Knowledge Discovery in Healthcare Data, KDH 2019. (pp. pp. 60-67). CEUR-WS: Macao, China. Green open access
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This list was generated on Sun Jan 11 09:29:10 2026 GMT.