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Number of items: 86.

A

Adeyelu, Tolulope Tosin; Moya-Garcia, Aurelio A; Orengo, Christine; (2022) Exploiting protein family and protein network data to identify novel drug targets for bladder cancer. Oncotarget , 13 (1) pp. 105-117. 10.18632/oncotarget.28175. Green open access
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Ahn, Minkoo; Włodarski, Tomasz; Mitropoulou, Alkistis; Chan, Sammy HS; Sidhu, Haneesh; Plessa, Elena; Becker, Thomas A; ... Christodoulou, John; + view all (2022) Author Correction: Modulating co-translational protein folding by rational design and ribosome engineering. [Corrigendum]. Nature Communications , 13 (1) , Article 5441. 10.1038/s41467-022-33270-4. Green open access
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Ahn, Minkoo; Włodarski, Tomasz; Mitropoulou, Alkistis; Chan, Sammy HS; Sidhu, Haneesh; Plessa, Elena; Becker, Thomas A; ... Christodoulou, John; + view all (2022) Modulating co-translational protein folding by rational design and ribosome engineering. Nature Communications , 13 , Article 4243. 10.1038/s41467-022-31906-z. Green open access
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B

Bagnéris, Claire; Senthil Kumar, Swathi L; Baratchian, Mehdi; Britt, Hannah M; Assafa, Tufa E; Thalassinos, Konstantinos; Collins, Mary K; (2022) Mechanistic insights into the activation of the IKK kinase complex by the Kaposi’s Sarcoma Herpes virus oncoprotein vFLIP. Journal of Biological Chemistry , 298 (6) , Article 102012. 10.1016/j.jbc.2022.102012. Green open access
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Bakx, Julia AM; Biebricher, Andreas S; King, Graeme A; Christodoulis, Panagiotis; Sarlós, Kata; Bizard, Anna H; Hickson, Ian D; ... Peterman, Erwin JG; + view all (2022) Duplex DNA and BLM regulate gate opening by the human TopoIIIα-RMI1-RMI2 complex. Nature Communications , 13 , Article 584. 10.1038/s41467-022-28082-5. Green open access
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Ballandras-Colas, A; Chivukula, V; Gruszka, DT; Shan, Z; Singh, PK; Pye, VE; McLean, RK; ... Cherepanov, P; + view all (2022) Multivalent interactions essential for lentiviral integrase function. Nature Communications , 13 (1) , Article 2416. 10.1038/s41467-022-29928-8. Green open access
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Blombach, Fabian; Smollett, Kathy L; Werner, Finn; (2022) ChIP-Seq Occupancy Mapping of the Archaeal Transcription Machinery. Methods in Molecular Biology , 2522 pp. 209-222. 10.1007/978-1-0716-2445-6_13. Green open access
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Bolik-Coulon, Nicolas; Hansen, D Flemming; Kay, Lewis E; (2022) Optimizing frequency sampling in CEST experiments. Journal of Biomolecular NMR , 76 (5-6) pp. 167-183. 10.1007/s10858-022-00403-2. Green open access
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Bordin, Nicola; Dallago, Christian; Heinzinger, Michael; Kim, Stephanie; Littmann, Maria; Rauer, Clemens; Steinegger, Martin; ... Orengo, Christine; + view all (2022) Novel machine learning approaches revolutionize protein knowledge. Trends in Biochemical Sciences 10.1016/j.tibs.2022.11.001. (In press). Green open access
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Borges, Adair; Lou, YL; Sadcheva, R; Al-Shayeb, B; Penev, PI; Jaffe, AL; Lei, S; ... Banfield, JF; + view all (2022) Widespread stop-codon recoding in bacteriophages may regulate translation of lytic genes. Nature Microbiology , 7 pp. 918-927. 10.1038/s41564-022-01128-6. Green open access
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Britt, Hannah M; Cragnolini, Tristan; Khatun, Suniya; Hatimy, Abubakar; James, Juliette; Page, Nathanael; Williams, Jonathan P; ... Vissers, Johannes PC; + view all (2022) Evaluation of Acquisition Modes for Semi-Quantitative Analysis by Targeted and Untargeted Mass Spectrometry. Rapid Communications in Mass Spectrometry , 36 (13) , Article e9308. 10.1002/rcm.9308. Green open access
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Britt, HM; Cragnolini, T; Thalassinos, K; (2022) Integration of Mass Spectrometry Data for Structural Biology. Chemical Reviews , 122 (8) pp. 7952-7986. 10.1021/acs.chemrev.1c00356. Green open access
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C

Cackett, G; Portugal, R; Matelska, D; Dixon, L; Werner, F; (2022) African Swine Fever Virus and host response - transcriptome profiling of the Georgia 2007/1 strain and porcine macrophages. Journal of Virology 10.1128/jvi.01939-21. (In press). Green open access
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Cackett, Gwenivere Arwen Sauvarin; (2022) Characterisation of the African Swine Fever Virus Transcription System. Doctoral thesis (Ph.D), UCL (University College London). Green open access
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Chan, Sammy HS; Włodarski, Tomasz; Streit, Julian O; Cassaignau, Anaïs ME; Woodburn, Lauren F; Ahn, Minkoo; Freiherr von Sass, Georg Johannes; ... Christodoulou, John; + view all (2022) The ribosome stabilizes partially folded intermediates of a nascent multi-domain protein. Nature Chemistry 10.1038/s41557-022-01004-0. Green open access
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Crisci, MA; Corsini, PM; Bordin, N; Chen, LX; Banfield, JF; Santini, JM; (2022) Detection and enumeration of Lak megaphages in microbiome samples by endpoint and quantitative PCR. STAR Protocols , 3 (1) 10.1016/j.xpro.2021.101029. Green open access
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Cui, J; Purton, S; Baganz, F; (2022) Characterisation of a simple 'hanging bag' photobioreactor for low-cost cultivation of microalgae. Journal of Chemical Technology & Biotechnology , 97 (3) pp. 608-619. 10.1002/jctb.6985. Green open access
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D

de Crécy-Lagard, Valérie; Amorin de Hegedus, Rocio; Arighi, Cecilia; Babor, Jill; Bateman, Alex; Blaby, Ian; Blaby-Haas, Crysten; ... Xu, Jin; + view all (2022) A roadmap for the functional annotation of protein families: a community perspective. Database 10.1093/database/baac062. (In press). Green open access
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Downton, P; Sanna, F; Maidstone, R; Poolman, TM; Hayter, EA; Dickson, SH; Ciccone, NA; ... Ray, DW; + view all (2022) Chronic inflammatory arthritis drives systemic changes in circadian energy metabolism. Proceedings of the National Academy of Sciences of the United States of America , 119 (18) , Article e2112781119. 10.1073/pnas.2112781119. Green open access
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Du, Tianhao; Bogush, Anna; Mašek, Ondřej; Purton, Saul; Campos, Luiza C; (2022) Algae, biochar and bacteria for acid mine drainage (AMD) remediation: A review. Chemosphere , Article 135284. 10.1016/j.chemosphere.2022.135284. (In press). Green open access
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Duan, Xiaowen; Norris, Dougall M; Humphrey, Sean; Yang, Pengyi; Cooke, Kristen C; Bultitude, Will P; Parker, Ben; ... Fazakerley, Daniel J; + view all (2022) Trafficking regulator of GLUT4-1 (TRARG1) is a GSK3 substrate. Biochemical Journal 10.1042/BCJ20220153. (In press). Green open access
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E

Efthymiou, Christos; Print, Emily HT; Simmons, Anna; Perkins, Stephen J; (2022) Analysis of 363 variants in the coagulation Factor 5 gene via an interactive web database reveals new insights into FV deficiency and FV Leiden. TH Open 10.1055/a-1987-5978. (In press). Green open access
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Eldrid, C; Zloh, M; Fotinou, C; Yelland, T; Yu, L; Mota, F; Selwood, DL; (2022) VEGFA, B, C: Implications of the C-Terminal Sequence Variations for the Interaction with Neuropilins. Biomolecules , 12 (3) , Article 372. 10.3390/biom12030372. Green open access
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Eldrid, Charles; Cragnolini, Tristan; Ben-Younis, Aisha; Zou, Junjie; Raleigh, Daniel P; Thalassinos, Konstantinos; (2022) Linking Gas-Phase and Solution-Phase Protein Unfolding via Mobile Proton Simulations. Analytical Chemistry , 94 (46) pp. 16113-16121. 10.1021/acs.analchem.2c03352. Green open access
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F

Fets, Louise; Bevan, Natalie; Nunes, Patrícia M; Campos, Sebastien; Dos Santos, Mariana Silva; Sherriff, Emma; MacRae, James I; ... Anastasiou, Dimitrios; + view all (2022) MOG analogues to explore the MCT2 pharmacophore, α-ketoglutarate biology and cellular effects of N-oxalylglycine. Communications Biology , 5 , Article 877. 10.1038/s42003-022-03805-y. Green open access
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Fets, Louise; Bevan, Natalie; Nunes, Patrícia M; Campos, Sebastien; Dos Santos, Mariana Silva; Sherriff, Emma; MacRae, James I; ... Anastasiou, Dimitrios; + view all (2022) Publisher Correction: MOG analogues to explore the MCT2 pharmacophore, α-ketoglutarate biology and cellular effects of N-oxalylglycine. [Corrigendum]. Communications Biology , 5 , Article 1019. 10.1038/s42003-022-03922-8. Green open access
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Flomm, Felix J; Soh, Timothy K; Schneider, Carola; Wedemann, Linda; Britt, Hannah M; Thalassinos, Konstantinos; Pfitzner, Søren; ... Bosse, Jens B; + view all (2022) Intermittent bulk release of human cytomegalovirus. PLoS Pathogens , 18 (8) , Article e1010575. 10.1371/journal.ppat.1010575. Green open access
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G

Garduño-González, KA; Peña-Benavides, SA; Araújo, RG; Castillo-Zacarías, C; Melchor-Martínez, EM; Oyervides-Muñoz, MA; Sosa-Hernández, JE; ... Parra-Saldívar, R; + view all (2022) Current challenges for modern vaccines and perspectives for novel treatment alternatives. Journal of Drug Delivery Science and Technology , 70 , Article 103222. 10.1016/j.jddst.2022.103222. Green open access
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Gathercole, Laura L; Nikolaou, Nikolaos; Harris, Shelley E; Arvaniti, Anastasia; Poolman, Toryn M; Hazlehurst, Jonathan M; Kratschmar, Denise V; ... Tomlinson, Jeremy W; + view all (2022) AKR1D1 knockout mice develop a sex dependent metabolic phenotype. Journal of Endocrinology 10.1530/JOE-21-0280. (In press). Green open access
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Gromiha, M Michael; Orengo, Christine; Sowdhamini, Ramanathan; Thornton, Janet; (2022) Srinivasan (1962-2021) in Bioinformatics and beyond. Bioinformatics 10.1093/bioinformatics/btac054. (In press). Green open access
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Guimaraes Koch, Sofia S; Thorpe, Robin; Kawasaki, Nana; Lefranc, Marie-Paule; Malan, Sarel; Martin, Andrew CR; Mignot, Gilles; ... Balocco, Raffaella; + view all (2022) International nonproprietary names for monoclonal antibodies: an evolving nomenclature system. mAbs , 14 (1) , Article 2075078. 10.1080/19420862.2022.2075078. Green open access
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H

Han, Yuchen; Kinfu, Birhanu M; Blombach, Fabian; Cackett, Gwenny; Zhang, Hongli; Pérez-García, Pablo; Krohn, Ines; ... Streit, Wolfgang R; + view all (2022) A novel metagenome-derived viral RNA polymerase and its application in a cell-free expression system for metagenome screening. Scientific Reports , 12 (1) , Article 17882. 10.1038/s41598-022-22383-x. Green open access
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Hasenahuer, Marcia A; Sanchis-Juan, Alba; Laskowski, Roman A; Baker, James A; Stephenson, James D; Orengo, Christine A; Lucy Raymond, F; (2022) Mapping the Constrained Coding Regions in the human genome to their corresponding proteins. Journal of Molecular Biology , Article 167892. 10.1016/j.jmb.2022.167892. (In press). Green open access
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Heinzinger, Michael; Littmann, Maria; Sillitoe, Ian; Bordin, Nicola; Orengo, Christine; Rost, Burkhard; (2022) Contrastive learning on protein embeddings enlightens midnight zone. NAR Genomics and Bioinformatics , 4 (2) , Article lqac043. 10.1093/nargab/lqac043. Green open access
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Hertweck, Arnulf; Vila de Mucha, Maria; Barber, Paul R; Dagil, Robert; Porter, Hayley; Ramos, Andres; Lord, Graham M; (2022) The TH1 cell lineage-determining transcription factor T-bet suppresses TH2 gene expression by redistributing GATA3 away from TH2 genes. Nucleic Acids Research , Article gkac258. 10.1093/nar/gkac258. (In press). Green open access
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Hoqani, UA; León, R; Purton, S; (2022) Over-expression of a cyanobacterial gene for 1-deoxy-D-xylulose-5-phosphate synthase in the chloroplast of Chlamydomonas reinhardtii perturbs chlorophyll: carotenoid ratios. Journal of King Saud University - Science , 34 (6) , Article 102141. 10.1016/j.jksus.2022.102141. (In press). Green open access
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Hunter, Ann Louise; Adamson, Antony; Poolman, Toryn; Grudzien, Magdalena; Loudon, Andrew; Ray, David; Bechtold, David A; (2022) HaloChIP-seq for Antibody-Independent Mapping of Mouse Transcription Factor Cistromes In Vivo. bio-protocol , 12 (13) , Article e4460. 10.21769/bioprotoc.4460. Green open access
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I

Ing, Gabriel; Hartley, Andrew M; Pinotsis, Nikos; Maréchal, Amandine; (2022) Cryo-EM structure of a monomeric yeast S. cerevisiae complex IV isolated with maltosides: Implications in supercomplex formation. Biochimica et Biophysica Acta (BBA) - Bioenergetics , 1863 (7) , Article 148591. 10.1016/j.bbabio.2022.148591. Green open access
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Iqbal, Hina; (2022) Molecular insights into complement activation by multidisciplinary biophysical approaches. Doctoral thesis (Ph.D), UCL (University College London). Green open access
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Ireland, S; Martin, A; (2022) GraphQL for the Delivery of Bioinformatics Web APIs and Application to ZincBind. Bioinformatics Advances 10.1080/13632434.2022.2095996. (In press). Green open access
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J

Jackson, Harry O; Taunt, Henry N; Mordaka, Paweł M; Kumari, Sujata; Smith, Alison G; Purton, Saul; (2022) CpPosNeg: A positive‐negative selection strategy allowing multiple cycles of marker‐free engineering of the Chlamydomonas plastome. Biotechnology Journal , 17 (10) , Article 2200088. 10.1002/biot.202200088. Green open access
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K

Karunanithy, Gogulan; Yuwen, Tairan; Kay, Lewis E; Hansen, D Flemming; (2022) Towards autonomous analysis of chemical exchange saturation transfer experiments using deep neural networks. Journal of Biomolecular NMR 10.1007/s10858-022-00395-z. (In press). Green open access
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Kausas, Marius; Esposito, Diego; Rittinger, Katrin; Fraternali, Franca; (2022) Characterisation of HOIP RBR E3 ligase conformational dynamics using integrative modelling. Scientific Reports , 12 (1) , Article 15201. 10.1038/s41598-022-18890-6. Green open access
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Keren, R; Méheust, R; Santini, JM; Thomas, A; West-Roberts, J; Banfield, JF; Alvarez-Cohen, L; (2022) Global genomic analysis of microbial biotransformation of arsenic highlights the importance of arsenic methylation in environmental and human microbiomes. Computational and Structural Biotechnology Journal 10.1016/j.csbj.2021.12.040. (In press). Green open access
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Khetan, R; Curtis, R; Deane, CM; Thorling Hadsund, J; Kar, U; Krawczyk, K; Kuroda, D; ... Martin, A; + view all (2022) Current advances in biopharmaceutical informatics: guidelines, impact and challenges in the computational developability assessment of antibody therapeutics. mAbs , 14 (1) , Article 2020082. 10.1080/19420862.2021.2020082. Green open access
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Kilpatrick, AM; Rahman, F; Anjum, A; Shome, S; Andalib, KMS; Banik, S; Chowdhury, SF; ... Welch, L; + view all (2022) Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia. Bioinformatics , 38 (1) i19-i27. 10.1093/bioinformatics/btac236. Green open access
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King, GA; Spakman, D; Peterman, EJG; Wuite, GJL; (2022) Generating Negatively Supercoiled DNA Using Dual-Trap Optical Tweezers. Optical Tweezers : Methods in Molecular Biology book series , 2478 pp. 243-272. 10.1007/978-1-0716-2229-2_9. Green open access
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Kostyuk, AI; Tossounian, M-A; Panova, AS; Thauvin, M; Raevskii, RI; Ezeriņa, D; Wahni, K; ... Belousov, VV; + view all (2022) Hypocrates is a genetically encoded fluorescent biosensor for (pseudo)hypohalous acids and their derivatives. Nature Communications , 13 (1) , Article 171. 10.1038/s41467-021-27796-2. Green open access
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L

Lalaurie, Christophe J; Splevins, Andrew; Barata, Teresa S; Bunting, Karen A; Higazi, Daniel R; Zloh, Mire; Spiteri, Valentina A; ... Dalby, Paul A; + view all (2022) Elucidation of critical pH-dependent structural changes in Botulinum Neurotoxin E. J Struct Biol , 214 (3) , Article 107876. 10.1016/j.jsb.2022.107876. Green open access
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Lam, SD; Waman, VP; Fraternali, F; Orengo, C; Lees, J; (2022) Structural and energetic analyses of SARS-CoV-2 N-terminal domain characterise sugar binding pockets and suggest putative impacts of variants on COVID-19 transmission. Computational and Structural Biotechnology Journal , 20 pp. 6302-6316. 10.1016/j.csbj.2022.11.004. Green open access
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Le Huray, Kyle IP; Bunney, Tom D; Pinotsis, Nikos; Kalli, Antreas C; Katan, Matilda; (2022) Characterization of the membrane interactions of phospholipase Cγ reveals key features of the active enzyme. Science Advances , 8 (25) , Article eabp9688. 10.1126/sciadv.abp9688. Green open access
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M

Macé, K; Meir, A; Lukoyanova, N; Liu, L; Chetrit, D; Hospenthal, MK; Roy, CR; (2022) The proteins DotY and DotZ modulate the dynamics and localization of the type IVB coupling complex of Legionella pneumophila. Molecular Microbiology , 117 (2) pp. 307-319. 10.1111/mmi.14847. Green open access
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Macé, Kévin; Vadakkepat, Abhinav K; Redzej, Adam; Lukoyanova, Natalya; Oomen, Clasien; Braun, Nathalie; Ukleja, Marta; ... Waksman, Gabriel; + view all (2022) Cryo-EM structure of a type IV secretion system. Nature 10.1038/s41586-022-04859-y. (In press). Green open access
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Malanchuk, OM; Bdzhola, AV; Tykhonkova, IO; Gout, IT; Filonenko, VV; (2022) Monoclonal antibodies to Coenzyme A. Biopolymers & Cell , 38 (4) pp. 215-223. 10.7124/bc.000A7F. Green open access
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Mallaby, Jessica; Ng, Joseph; Stewart, Alex; Sinclair, Emma; Dunn-Walters, Deborah; Hershberg, Uri; (2022) Chickens, more than humans, focus the diversity of their immunoglobulin genes on the complementarity-determining region but utilise amino acids, indicative of a more cross-reactive antibody repertoire. Frontiers in Immunology , 13 , Article 837246. 10.3389/fimmu.2022.837246. Green open access
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Mapstone, Lydia J; Leite, Mara N; Purton, Saul; Crawford, Ian A; Dartnell, Lewis; (2022) Cyanobacteria and microalgae in supporting human habitation on Mars. Biotechnology Advances , 59 , Article 107946. 10.1016/j.biotechadv.2022.107946. Green open access
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Mapstone, Lydia J; Taunt, Henry N; Cui, Jing; Purton, Saul; Brooks, Tom GR; (2022) ADA: an open-source software platform for plotting and analysis of data from laboratory photobioreactors. Applied Phycology , 3 (1) pp. 16-26. 10.1080/26388081.2021.2023632. Green open access
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Messenger, Cassie; (2022) Investigating the PKM2-dependent regulation of glycolysis by amino acids. Masters thesis (M.Phil), UCL (University College London). Green open access
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Monteleone, Stefania; Fedorov, Dmitri G; Townsend-Nicholson, Andrea; Southey, Michelle; Bodkin, Michael; Heifetz, Alexander; (2022) Hotspot Identification and Drug Design of Protein–Protein Interaction Modulators Using the Fragment Molecular Orbital Method. Journal of Chemical Information and Modeling , 62 (16) pp. 3784-3799. 10.1021/acs.jcim.2c00457. Green open access
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N

Nicheperovich, Alina; Townsend-Nicholson, Andrea; (2022) Towards Precision Oncology: The Role of Smoothened and Its Variants in Cancer. Journal of Personalized Medicine , 12 (10) , Article 1648. 10.3390/jpm12101648. Green open access
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P

Pilotto, Simona; Werner, Finn; (2022) How to Shut Down Transcription in Archaea during Virus Infection. Microorganisms , 10 (9) , Article 1824. 10.3390/microorganisms10091824. Green open access
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Poolman, Toryn M; Townsend-Nicholson, Andrea; Cain, Amanda; (2022) Teaching genomics to life science undergraduates using cloud computing platforms with open datasets. Biochemistry and Molecular Biology Education , 50 (5) pp. 446-449. 10.1002/bmb.21646. Green open access
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Potterton, A; Heifetz, A; Townsend-Nicholson, A; (2022) Predicting Residence Time of GPCR Ligands with Machine Learning. Methods in Molecular Biology , 2390 pp. 191-205. 10.1007/978-1-0716-1787-8_8. Green open access
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R

Rengachari, Srinivasan; Schilbach, Sandra; Kaliyappan, Thangavelu; Gouge, Jerome; Zumer, Kristina; Schwarz, Juliane; Urlaub, Henning; ... Cramer, Patrick; + view all (2022) Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II. Nature Structural & Molecular Biology , 29 (12) pp. 1159-1169. 10.1038/s41594-022-00857-w. Green open access
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Rojano, Elena; Jabato, Fernando M; Perkins, James R; Cordoba-Caballero, Jose; Garcia-Criado, Federico; Sillitoe, Ian; Orengo, Christine; ... Seoane-Zonjic, Pedro; + view all (2022) Assigning protein function from domain-function associations using DomFun. BMC Bioinformatics , 23 (1) , Article 43. 10.1186/s12859-022-04565-6. Green open access
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Romano, Lisa EL; Aw, Wen Yih; Hixson, Kathryn M; Novoselova, Tatiana V; Havener, Tammy M; Howell, Stefanie; Taylor-Blake, Bonnie; ... Wolter, Justin M; + view all (2022) Multi-omic profiling reveals the ataxia protein sacsin is required for integrin trafficking and synaptic organization. Cell Reports , 41 (5) , Article 111580. 10.1016/j.celrep.2022.111580. Green open access
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S

Sen, Neeladri; Anishchenko, Ivan; Bordin, Nicola; Sillitoe, Ian; Velankar, Sameer; Baker, David; Orengo, Christine; (2022) Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs. Briefings in Bioinformatics 10.1093/bib/bbac187. (In press). Green open access
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Sen, Neeladri; Madhusudhan, Mallur S; (2022) A structural database of chain–chain and domain–domain interfaces of proteins. Protein Science , 31 (9) , Article e4406. 10.1002/pro.4406. Green open access
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Soelistyo, Christopher; Vallardi, Giulia; Charras, Guillaume; Lowe, Alan; (2022) Learning biophysical determinants of cell fate with deep neural networks. Nature Machine Intelligence , 4 pp. 636-644. 10.1038/s42256-022-00503-6. Green open access
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Soloviev, Zoja; Bullock, Joshua MA; James, Juliette MB; Sauerwein, Andrea C; Nettleship, Joanne E; Owens, Raymond J; Hansen, D Flemming; ... Thalassinos, Konstantinos; + view all (2022) Structural mass spectrometry decodes domain interaction and dynamics of the full-length Human Histone Deacetylase 2. Biochimica et Biophysica Acta - Proteins and Proteomics , 1870 (3) , Article 140759. 10.1016/j.bbapap.2022.140759. Green open access
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Spakman, Dian; Clement, Tinka VM; Biebricher, Andreas S; King, Graeme A; Singh, Manika I; Hickson, Ian D; Peterman, Erwin JG; (2022) PICH acts as a force-dependent nucleosome remodeler. Nature Communications , 13 , Article 7277. 10.1038/s41467-022-35040-8. Green open access
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Stiens, J; Arnvig, KB; Kendall, SL; Nobeli, I; (2022) Challenges in defining the functional, non-coding, expressed genome of members of the Mycobacterium tuberculosis complex. Molecular Microbiology , 117 (1) pp. 20-31. 10.1111/mmi.14862. Green open access
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Sweet-Jones, James; Ahmad, Maham; Martin, Andrew; (2022) Antibody markup language (AbML) — a notation language for antibody-based drug formats and software for creating and rendering AbML (abYdraw). mAbs , 14 (1) , Article 2101183. 10.1080/19420862.2022.2101183. Green open access
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Szijj, Peter; (2022) Investigation of chemically constructed bispecific antibodies and their conjugates for the treatment of type 1 diabetes and cancer. Doctoral thesis (Ph.D), University College London (UCL).

T

Tan, Cedric CS; Lam, Su Datt; Richard, Damien; Owen, Christopher J; Berchtold, Dorothea; Orengo, Christine; Nair, Meera Surendran; ... Balloux, François; + view all (2022) Transmission of SARS-CoV-2 from humans to animals and potential host adaptation. Nature Communications , 13 (1) , Article 2988. 10.1038/s41467-022-30698-6. Green open access
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Tordai, Hedvig; Suhajda, Erzsebet; Sillitoe, Ian; Nair, Sreenath; Varadi, Mihaly; Hegedus, Tamas; (2022) Comprehensive Collection and Prediction of ABC Transmembrane Protein Structures in the AI Era of Structural Biology. International Journal of Molecular Sciences , 23 (16) , Article 8877. 10.3390/ijms23168877. Green open access
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Tossounian, Maria-Armineh; Baczynska, Maria; Dalton, William; Newell, Charlie; Ma, Yilin; Das, Sayoni; Semelak, Jonathan Alexis; ... Gout, Ivan; + view all (2022) Profiling the Site of Protein CoAlation and Coenzyme A Stabilization Interactions. Antioxidants , 11 (7) , Article 1362. 10.3390/antiox11071362. Green open access
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Tubiana, Thibault; Sillitoe, Ian; Orengo, Christine; Reuter, Nathalie; (2022) Dissecting peripheral protein-membrane interfaces. PLoS Computational Biology , 18 (12) , Article e1010346. 10.1371/journal.pcbi.1010346. Green open access
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U

Ulicna, Kristina; Ho, Laure TL; Soelistyo, Christopher J; Day, Nathan J; Lowe, Alan R; (2022) Convolutional Neural Networks for Classifying Chromatin Morphology in Live-Cell Imaging. Methods in Molecular Biology , 2476 pp. 17-30. 10.1007/978-1-0716-2221-6_3. Green open access
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Varadi, Mihaly; Anyango, Stephen; Armstrong, David; Berrisford, John; Choudhary, Preeti; Deshpande, Mandar; Nadzirin, Nurul; ... Velankar, Sameer; + view all (2022) PDBe-KB: collaboratively defining the biological context of structural data. Nucleic Acids Research , 50 (D1) D534-D542. 10.1093/nar/gkab988. Green open access
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Varadi, Mihaly; Nair, Sreenath; Sillitoe, Ian; Tauriello, Gerardo; Anyango, Stephen; Bienert, Stefan; Borges, Clemente; ... Velankar, Sameer; + view all (2022) 3D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources. Gigascience , 11 , Article giac118. 10.1093/gigascience/giac118. Green open access
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Veeravalli, Sunil; Dorsa, Varshavi; Scott, Flora; Dorna, Varshavi; Pullen, Frank; Kirill, Veselkov; Phillips, Ian; ... Shephard, Elizabeth; + view all (2022) Treatment of wild-type mice with 2,3-butanediol, a urinary biomarker of fmo5-/- mice, decreases plasma cholesterol and epididymal fat deposition. Frontiers in Physiology , 13 , Article 859681. 10.3389/fphys.2022.859681. Green open access
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W

Waudby, CA; Burridge, C; Cabrita, LD; Christodoulou, J; (2022) Thermodynamics of co-translational folding and ribosome–nascent chain interactions. Current Opinion in Structural Biology , 74 , Article 102357. 10.1016/j.sbi.2022.102357. Green open access
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Waudby, Christopher A; Alvarez-Teijeiro, Saul; Josue Ruiz, E; Suppinger, Simon; Pinotsis, Nikos; Brown, Paul R; Behrens, Axel; ... Mylona, Anastasia; + view all (2022) An intrinsic temporal order of c-JUN N-terminal phosphorylation regulates its activity by orchestrating co-factor recruitment. Nature Communications , 13 (1) , Article 6133. 10.1038/s41467-022-33866-w. Green open access
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Werner, Finn; (2022) Progress and Challenges in Archaeal Molecular Biology. Methods in Molecular Biology , 2522 pp. 205-207. 10.1007/978-1-0716-2445-6_12. Green open access
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Wöhnke, Elisabeth; Cackett, Gwenny; Werner, Finn; Blome, Sandra; Mettenleiter, Thomas C; Karger, Axel; (2022) Proteome Analysis of Swine Macrophages after Infection with Two Genotype II African Swine Fever Isolates of Different Pathogenicity. Viruses , 14 (10) , Article 2140. 10.3390/v14102140. Green open access
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This list was generated on Wed May 8 17:34:43 2024 BST.