Browse by UCL people
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Number of items: 17.
Article
Brown, AC;
Bryant, JM;
Einer-Jensen, K;
Holdstock, J;
Houniet, DT;
Chan, JZ;
Depledge, DP;
... Breuer, J; + view all
(2015)
Rapid Whole-Genome Sequencing of Mycobacterium tuberculosis Isolates Directly from Clinical Samples.
Journal of Clinical Microbiology
, 53
(7)
pp. 2230-2237.
10.1128/JCM.00486-15.
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Christiansen, MT;
Brown, AC;
Kundu, S;
Tutill, HJ;
Williams, R;
Brown, JR;
Holdstock, J;
... Breuer, J; + view all
(2014)
Whole-genome enrichment and sequencing of Chlamydia trachomatis directly from clinical samples.
BMC Infect Dis
, 14
(1)
, Article 591. 10.1186/s12879-014-0591-3.
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Depledge, D;
Gray, E;
Kundu, S;
Cooray, S;
Poulsen, A;
Aaby, P;
Breuer, J;
(2014)
Evolution of Cocirculating Varicella-Zoster Virus Genotypes during a Chickenpox Outbreak in Guinea-Bissau.
Journal of Virology
, 88
(24)
pp. 13936-13946.
10.1128/JVI.02337-14.
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Depledge, DP;
Brown, J;
Macanovic, J;
Underhill, G;
Breuer, J;
(2016)
Viral genome sequencing proves nosocomial transmission of fatal varicella.
Journal of Infectious Diseases
, 214
(9)
pp. 1399-1402.
10.1093/infdis/jiw398.
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Depledge, DP;
Evans, KJ;
Ivens, AC;
Aziz, N;
Maroof, A;
Kaye, PM;
Smith, DF;
(2009)
Comparative expression profiling of Leishmania: modulation in gene expression between species and in different host genetic backgrounds.
PLoS Negl Trop Dis
, 3
(7)
, Article e476. 10.1371/journal.pntd.0000476.
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Depledge, DP;
Kundu, S;
Jensen, NJ;
Gray, ER;
Jones, M;
Steinberg, S;
Gershon, A;
... Breuer, J; + view all
(2014)
Deep Sequencing of Viral Genomes Provides Insight into the Evolution and Pathogenesis of Varicella Zoster Virus and Its Vaccine in Humans.
Molecular Biology and Evolution
, 31
(2)
pp. 397-409.
10.1093/molbev/mst210.
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Depledge, DP;
MacLean, LM;
Hodgkinson, MR;
Smith, BA;
Jackson, AP;
Ma, S;
Uliana, SR;
(2010)
Leishmania-specific surface antigens show sub-genus sequence variation and immune recognition.
PLoS Negl Trop Dis
, 4
(9)
, Article e829. 10.1371/journal.pntd.0000829.
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Depledge, DP;
Ouwendijk, WJD;
Sadaoka, T;
Braspenning, SE;
Mori, Y;
Cohrs, RJ;
Verjans, GMGM;
(2018)
A spliced latency-associated VZV transcript maps antisense to the viral transactivator gene 61.
Nature Communications
, 9
(1)
, Article 1167. 10.1038/s41467-018-03569-2.
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Depledge, DP;
Palser, AL;
Watson, SJ;
Lai, IY;
Gray, ER;
Grant, P;
Kanda, RK;
... Breuer, J; + view all
(2011)
Correction: specific capture and whole-genome sequencing of viruses from clinical samples.
PLOS One
, 7
(1)
, Article e27805. 10.1371/annotation/3f1444bc-ab9d-4112-958a-2e068792f26f.
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Depledge, DP;
Palser, AL;
Watson, SJ;
Lai, IY;
Gray, ER;
Grant, P;
Kanda, RK;
... Breuer, J; + view all
(2011)
Specific capture and whole-genome sequencing of viruses from clinical samples.
PLOS One
, 6
(11)
, Article e27805. 10.1371/journal.pone.0027805.
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Depledge, DP;
Yamanishi, K;
Gomi, Y;
Gershon, AA;
Breuer, J;
(2016)
Deep Sequencing of Distinct Preparations of the Live Attenuated Varicella-Zoster Virus Vaccine Reveals a Conserved Core of Attenuating Single-Nucleotide Polymorphisms.
Journal of Virology
, 90
(19)
pp. 8698-8704.
10.1128/JVI.00998-16.
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Houldcroft, CJ;
Breuer, J;
Bryant, J;
Depledge, D;
Margetts, B;
Simmonds, J;
Nicolaou, S;
... PATHSEEK, .; + view all
(2016)
Detection of low frequency multi-drug resistance and novel putative maribavir resistance in immunocompromised paediatric patients with cytomegalovirus.
Frontiers in Microbiology
, 7
, Article 1317. 10.3389/fmicb.2016.01317.
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Lassalle, F;
Depledge, DP;
Reeves, MB;
Brown, AC;
Christiansen, MT;
Tutill, HJ;
Williams, RJ;
... Breuer, J; + view all
(2016)
Islands of linkage in an ocean of pervasive recombination reveals two-speed evolution of human cytomegalovirus genomes.
Virus Evolution
, 2
(1)
, Article vew017. 10.1093/ve/vew017.
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Pheasant, K;
Moller-Levet, CS;
Jones, J;
Depledge, D;
Breuer, J;
Elliott, G;
(2019)
Nuclear-cytoplasmic compartmentalization of the herpes simplex virus 1 infected cell transcriptome is co-ordinated by the viral endoribonuclease vhs and cofactors to facilitate the translation of late proteins.
PLoS Pathogens
, 14
(11)
, Article e1007331. 10.1371/journal.ppat.1007331.
(In press).
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Sadaoka, T;
Depledge, DP;
Rajbhandari, L;
Venkatesan, A;
Breuer, J;
Cohen, JI;
(2016)
In vitro system using human neurons demonstrates that varicella-zoster vaccine virus is impaired for reactivation, but not latency.
Proceedings Of The National Academy Of Sciences Of The United States Of America
, 113
(17)
E2403-E2412.
10.1073/pnas.1522575113.
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Watson, SJ;
Welkers, MR;
Depledge, DP;
Coulter, E;
Breuer, JM;
de Jong, MD;
Kellam, P;
(2013)
Viral population analysis and minority-variant detection using short read next-generation sequencing.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences
, 368
(1614)
, Article 20120205. 10.1098/rstb.2012.0205.
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Weinert, LA;
Depledge, DP;
Kundu, S;
Gershon, AA;
Nichols, RA;
Balloux, F;
Welch, JJ;
(2015)
Rates of vaccine evolution show strong effects of latency: implications for varicella zoster virus epidemiology.
Molecular Biology and Evolution
, 32
(4)
1020 - 1028.
10.1093/molbev/msu406.
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