Browse by UCL people
Group by: Type | Date
Number of items: 24.
Article
Fu, Yunguan;
Li, Yiwen;
Saeed, Shaheer U;
Clarkson, Matthew J;
Hu, Yipeng;
(2023)
A Recycling Training Strategy for Medical Image Segmentation with Diffusion Denoising Models.
Machine Learning for Biomedical Imaging
, 2
(SI)
pp. 507-546.
10.59275/j.melba.2023-fbe4.
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Fu, Y;
Brown, NM;
Saeed, SU;
Casamitjana, A;
Baum, ZMC;
Delaunay, R;
Yang, Q;
... Hu, Y; + view all
(2020)
DeepReg: a deep learning toolkit for medical image registration.
The Journal of Open Source Software
, 5
(55)
, Article 2705. 10.21105/joss.02705.
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Gayo, Iani JMB;
Saeed, Shaheer U;
Bonmati, Ester;
Barratt, Dean C;
Clarkson, Matthew J;
Hu, Yipeng;
(2024)
The distinct roles of reinforcement learning between pre-procedure and intra-procedure planning for prostate biopsy.
International Journal of Computer Assisted Radiology and Surgery
10.1007/s11548-024-03084-4.
(In press).
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Li, Yiwen;
Fu, Yunguan;
Gayo, Iani JMB;
Yang, Qianye;
Min, Zhe;
Saeed, Shaheer U;
Yan, Wen;
... Hu, Yipeng; + view all
(2023)
Prototypical few-shot segmentation for cross-institution male pelvic structures with spatial registration.
Medical Image Analysis
, Article 102935. 10.1016/j.media.2023.102935.
(In press).
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Saeed, Shaheer U;
Fu, Yunguan;
Stavrinides, Vasilis;
Baum, Zachary MC;
Yang, Qianye;
Rusu, Mirabela;
Fan, Richard E;
... Hu, Yipeng; + view all
(2022)
Image quality assessment for machine learning tasks using meta-reinforcement learning.
Medical Image Analysis
, 78
, Article 102427. 10.1016/j.media.2022.102427.
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Saeed, Shaheer U;
Ramalhinho, João;
Montaña-Brown, Nina;
Bonmati, Ester;
Pereira, Stephen P;
Davidson, Brian;
Clarkson, Matthew J;
(2025)
Guided ultrasound acquisition for nonrigid image registration using reinforcement learning.
Medical Image Analysis
, 102
, Article 103555. 10.1016/j.media.2025.103555.
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Saeed, Shaheer U;
Ramalhinho, João;
Pinnock, Mark;
Shen, Ziyi;
Fu, Yunguan;
Montaña-Brown, Nina;
Bonmati, Ester;
... Hu, Yipeng; + view all
(2024)
Active learning using adaptable task-based prioritisation.
Medical Image Analysis
, 95
, Article 103181. 10.1016/j.media.2024.103181.
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Saeed, Shaheer Ullah;
Yan, Wen;
Yunguan, Fu;
Giganti, Francesco;
Yang, Qianye;
Baum, Zachary;
Rusu, Mirabela;
... Hu, Yipeng; + view all
(2022)
Image quality assessment by overlapping task-specific and task-agnostic measures: application to prostate multiparametric MR images for cancer segmentation.
Machine Learning for Biomedical Imaging
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Saeed, SU;
Huang, S;
Ramalhinho, J;
Gayo, IJMB;
Montaña-Brown, N;
Bonmati, E;
Pereira, SS;
... Hu, Y; + view all
(2024)
Competing for pixels: a self-play algorithm for weakly-supervised semantic segmentation.
IEEE Transactions on Pattern Analysis and Machine Intelligence
(In press).
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Proceedings paper
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Chalcroft, LF;
Qu, J;
Martin, SA;
Gayo, IJMB;
Minore, GV;
Singh, IRD;
Saeed, SU;
... Hu, Y; + view all
(2021)
Development and evaluation of intraoperative ultrasound segmentation with negative image frames and multiple observer labels.
In:
International Workshop on Advances in Simplifying Medical Ultrasound ASMUS 2021: Simplifying Medical Ultrasound.
(pp. pp. 25-34).
Springer, Cham
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Fu, Yunguan;
Li, Yiwen;
Saeed, Shaheer U;
Clarkson, Matthew J;
Hu, Yipeng;
(2024)
Importance of Aligning Training Strategy with Evaluation for Diffusion Models in 3D Multiclass Segmentation.
In: Mukhopadhyay, A and Oksuz, I and Engelhardt, S and Zhu, D and Yuan, Y, (eds.)
Deep Generative Models (DGM4MICCAI 2023).
(pp. pp. 86-95).
Springer
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Huang, S;
Xu, T;
Shen, Z;
Saeed, SU;
Yan, W;
Barratt, D;
Hu, Y;
(2024)
One Registration is Worth Two Segmentations.
In:
Medical Image Computing and Computer Assisted Intervention – MICCAI 2024.
(pp. pp. 665-675).
Springer Nature: Cham, Switzerland.
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Karam, L;
Wang, Y;
Kasivisvanathan, V;
Rusu, M;
Hu, Y;
Saeed, SU;
(2025)
Promptable Cancer Segmentation Using Minimal Expert-Curated Data.
In: Ali, S and Hogg, DC and Peckham, M, (eds.)
Medical Image Understanding and Analysis: 29th Annual Conference, MIUA 2025, Leeds, UK, July 15–17, 2025, Proceedings, Part III.
(pp. pp. 44-58).
Springer: Cham, Switzerland.
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Min, Zhe;
Baum, Zachary MC;
Saeed, Shaheer U;
Emberton, Mark;
Barratt, Dean C;
Taylor, Zeike A;
Hu, Yipeng;
(2023)
Non-rigid Medical Image Registration using Physics-informed Neural Networks.
In: Frangi, Alejandro and De Bruijne, Marleen and Wassermann, Demian and Navab, Nassir, (eds.)
Information Processing in Medical Imaging: IPMI 2023.
(pp. pp. 601-613).
Springer: Cham, Switzerland.
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Montaña-Brown, N;
Saeed, SU;
Abdulaal, A;
Dowrick, T;
Kilic, Y;
Wilkinson, S;
Gao, J;
... Clarkson, MJ; + view all
(2023)
SARAMIS: Simulation Assets for Robotic Assisted and Minimally Invasive Surgery.
In:
Advances in Neural Information Processing Systems 36 (NeurIPS 2023).
NeurIPS
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Pocius, M;
Yan, W;
Barratt, DC;
Emberton, M;
Clarkson, MJ;
Hu, Y;
Saeed, SU;
(2024)
Weakly Supervised Localisation of Prostate Cancer Using Reinforcement Learning for Bi-Parametric MR Images.
In:
2024 IEEE International Symposium on Biomedical Imaging (ISBI).
IEEE: Athens, Greece.
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Saeed, Shaheer U;
Syer, Tom;
Yan, Wen;
Yang, Qianye;
Emberton, Mark;
Punwani, Shonit;
Clarkson, Matthew John;
... Hu, Yipeng; + view all
(2023)
Bi-parametric prostate MR image synthesis using pathology and sequence-conditioned stable diffusion.
In: Oguz, Ipek and Noble, Jack H and Li, Xiaoxiao and Styner, Martin and Baumgartner, Christian and Rusu, Mirabela and Heimann, Tobias and Kontos, Despina and Landman, Bennett A and Dawant, Benoit M, (eds.)
Proceedings of Machine Learning Research.
(pp. pp. 814-828).
PMLR: Nashville, TN, USA.
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Saeed, SU;
Fu, Y;
Stavrinides, V;
Baum, ZMC;
Yang, Q;
Rusu, M;
Fan, RE;
... Hu, Y; + view all
(2021)
Adaptable image quality assessment using meta-reinforcement learning of task amenability.
In:
Simplifying Medical Ultrasound.
(pp. pp. 191-201).
Springer: Cham, Switzerland.
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Saeed, SU;
Fu, Y;
Baum, ZMC;
Yang, Q;
Rusu, M;
Fan, RE;
Sonn, GA;
... Hu, Y; + view all
(2021)
Learning image quality assessment by reinforcing task amenable data selection.
In:
International Conference on Information Processing in Medical Imaging.
(pp. pp. 755-766).
Springer: Cham, Switzerland.
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Saeed, SU;
Taylor, ZA;
Pinnock, MA;
Emberton, M;
Barratt, DC;
Hu, Y;
(2020)
Prostate Motion Modelling Using Biomechanically-Trained Deep Neural Networks on Unstructured Nodes.
In: Martel, AL and Abolmaesumi, P and Stoyanov, D and Mateus, D and Zuluaga, MA and Zhou, SK and Racoceanu, D and Joskowicz, L, (eds.)
Medical Image Computing and Computer Assisted Intervention – MICCAI 2020: 23rd International Conference, Lima, Peru, October 4–8, 2020, Proceedings, Part IV.
(pp. pp. 650-659).
Springer: Cham, Switzerland.
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Tan, C;
Hu, Y;
Saeed, SU;
(2025)
SPARS: Self-Play Adversarial Reinforcement Learning for Segmentation of Liver Tumours.
In: Ali, S and Hogg, DC and Peckham, M, (eds.)
Medical Image Understanding and Analysis: 29th Annual Conference, MIUA 2025, Leeds, UK, July 15–17, 2025, Proceedings, Part III.
(pp. pp. 59-72).
Springer: Cham, Switzerland.
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Yi, W;
Stavrinides, V;
Baum, ZMC;
Yang, Q;
Barratt, DC;
Clarkson, MJ;
Hu, Y;
(2023)
Boundary-RL: Reinforcement Learning for Weakly-Supervised Prostate Segmentation in TRUS Images.
In: Cao, Xiaohuan and Xu, Xuanang and Rekik, Islem and Cui, Zhiming and Ouyang, Xi, (eds.)
Machine Learning in Medical Imaging.
(pp. pp. 277-288).
Springer Nature: Cham, Switzerland.
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Yi, Weixi;
Wang, Yipei;
Thorley, Natasha;
Ng, Alexander;
Punwani, Shonit;
Kasivisvanathan, Veeru;
Barratt, Dean C;
... Hu, Yipeng; + view all
(2025)
T2-Only Prostate Cancer Prediction by Meta-Learning from BI-Parametric MR Imaging.
In:
2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI).
(pp. pp. 1-5).
IEEE: Houston, TX, USA.
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Thesis
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Saeed, Shaheer Ullah;
(2024)
Multi-level optimisation using deep meta learning for medical image analysis.
Doctoral thesis (Ph.D), UCL (University College London).
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