Browse by UCL people
Group by: Type | Date
Number of items: 21.
Article
Das, S;
Dawson, NL;
Orengo, CA;
(2015)
Diversity in protein domain superfamilies.
Current Opinion in Genetics & Development
, 35
pp. 40-49.
10.1016/j.gde.2015.09.005.
|
 |
|
Das, S;
Lee, D;
Sillitoe, I;
Dawson, NL;
Lees, JG;
Orengo, CA;
(2015)
Functional classification of CATH superfamilies: a domain-based approach for protein function annotation.
Bioinformatics
, 31
(21)
pp. 3460-3467.
10.1093/bioinformatics/btv398.
|
|
Das, S;
Sillitoe, I;
Lee, D;
Lees, JG;
Dawson, NL;
Ward, J;
Orengo, CA;
(2015)
CATH FunFHMMer web server: protein functional annotations using functional family assignments.
Nucleic Acids Res
, 43
(W1)
W148-W153.
10.1093/nar/gkv488.
|
|
|
Dawson, NL;
Lewis, TE;
Das, S;
Lees, JG;
Lee, D;
Ashford, P;
Orengo, CA;
(2017)
CATH: an expanded resource to predict protein function through structure and sequence.
Nucleic Acids Research
, 45
(D1)
D289-D295.
10.1093/nar/gkw1098.
|
|
Dobrijevic, D;
Benhamou, L;
Aliev, AE;
Méndez-Sánchez, D;
Dawson, N;
Baud, D;
Tappertzhofen, N;
... Ward, JM; + view all
(2019)
Metagenomic ene-reductases for the bioreduction of sterically challenging enones.
RSC Advances
, 9
(63)
pp. 36608-36614.
10.1039/c9ra06088j.
|
|
|
Ekong, R;
Emmett, W;
Dawson, NL;
Futema, M;
Plagnol, V;
Humphries, SE;
Povey, MS;
(2016)
Variants within TSC2 exons 25 and 31 are very unlikely to cause clinically diagnosable tuberous sclerosis.
Human Mutation
, 37
(4)
pp. 364-370.
10.1002/humu.22951.
|
|
Jeffries, JWE;
Dawson, N;
Orengo, C;
Moody, TS;
Quinn, DJ;
Hailes, HC;
Ward, JM;
(2016)
Metagenome Mining: A Sequence Directed Strategy for the Retrieval of Enzymes for Biocatalysis.
ChemistrySelect
, 1
(10)
pp. 2217-2220.
10.1002/slct.201600515.
|
|
Jiang, Y;
Oron, TR;
Clark, WT;
Bankapur, AR;
D'Andrea, D;
Lepore, R;
Funk, CS;
... Radivojac, P; + view all
(2016)
An expanded evaluation of protein function prediction methods shows an improvement in accuracy.
Genome Biology
, 17
, Article 184. 10.1186/s13059-016-1037-6.
|
|
|
Kudsiova, L;
Welser, K;
Campbell, F;
Mohammadi, A;
Dawson, N;
Cui, L;
Hailes, HC;
... Tabor, AB; + view all
(2016)
Delivery of siRNA using ternary complexes containing branched cationic peptides: the role of peptide sequence, branching and targeting.
Molecular BioSystems
, 12
(3)
pp. 934-951.
10.1039/c5mb00754b.
|
|
|
Lam, SD;
Dawson, NL;
Das, S;
Sillitoe, I;
Ashford, P;
Lee, D;
Lehtinen, S;
... Lees, JG; + view all
(2016)
Gene3D: expanding the utility of domain assignments.
Nucleic Acids Res
, 44
(D1)
D404-D409.
10.1093/nar/gkv1231.
|
|
|
Lee, D;
Das, S;
Dawson, NL;
Dobrijevic, D;
Ward, J;
Orengo, C;
(2016)
Novel computational protocols for functionally classifying and characterising serine beta-lactamases.
PLoS Computational Biology
, 12
(6)
, Article e1004926. 10.1371/journal.pcbi.1004926.
|
|
Lees, JG;
Dawson, NL;
Sillitoe, I;
Orengo, CA;
(2016)
Functional innovation from changes in protein domains and their combinations.
Current Opinion in Structural Biology
, 38
pp. 44-52.
10.1016/j.sbi.2016.05.016.
|
|
|
Lees, JG;
Lee, D;
Studer, RA;
Dawson, NL;
Sillitoe, I;
Das, S;
Yeats, C;
... Orengo, CA; + view all
(2013)
Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis.
Nucleic Acids Research
, 42
(D1)
D240-D245.
10.1093/nar/gkt1205.
|
 |
|
Lewis, T;
Sillitoe, I;
Dawson, N;
Lam, SD;
Clarke, T;
Lee, D;
Orengo, C;
(2017)
Gene3D: Extensive prediction of globular domains in proteins.
Nucleic Acids Research
, Article gkx1069. 10.1093/nar/gkx1069/4588111.
|
|
|
Lewis, TE;
Sillitoe, I;
Dawson, N;
Lam, SD;
Clarke, T;
Lee, D;
Orengo, C;
(2017)
Gene3D: Extensive prediction of globular domains in proteins.
[Corrigendum].
Nucleic Acids Research
10.1093/nar/gkx1187.
|
|
|
Moya-García, A;
Adeyelu, T;
Kruger, FA;
Dawson, NL;
Lees, JG;
Overington, JP;
Orengo, C;
(2017)
Structural and Functional View of Polypharmacology.
Scientific Reports
, 7
, Article 10102. 10.1038/s41598-017-10012-x.
|
 |
|
Sillitoe, I;
Dawson, N;
Lewis, TE;
Das, S;
Lees, JG;
Ashford, P;
Tolulope, A;
... Orengo, CA; + view all
(2019)
CATH: expanding the horizons of structure-based functional annotations for genome sequences.
Nucleic Acids Research
, 47
(D1)
D280-D284.
10.1093/nar/gky1097.
|
|
Sillitoe, I;
Dawson, N;
Thornton, J;
Orengo, C;
(2015)
The history of the CATH structural classification of protein domains.
Biochimie
, 119
pp. 209-217.
10.1016/j.biochi.2015.08.004.
|
|
|
Sillitoe, I;
Lewis, TE;
Cuff, A;
Das, S;
Ashford, P;
Dawson, NL;
Furnham, N;
... Orengo, CA; + view all
(2014)
CATH: comprehensive structural and functional annotations for genome sequences.
Nucleic Acids Research
, 43
(D1)
D376-D381.
10.1093/nar/gku947.
|
|
Working / discussion paper
|
Lam, SD;
Bordin, N;
Waman, VP;
Scholes, HM;
Ashford, P;
Sen, N;
van Dorp, L;
... Orengo, CA; + view all
(2020)
SARS-CoV-2 spike protein predicted to form complexes with host receptor protein orthologues from a broad range of mammals.
BioRxiv: Cold Spring Harbor, NY, USA.
|
Thesis
|
Dawson, NL;
(2015)
Characterising functional diversity in protein domain superfamilies and metagenomes.
Doctoral thesis , UCL (University College London).
|
|
