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The de novo design of a biocompatible and functional integral membrane protein using minimal sequence complexity

Lalaurie, Christophe J; Dufour, Virginie; Meletiou, Anna; Ratcliffe, Sarah; Harland, Abigail; Wilson, Olivia; Vamasiri, Chiratchaya; ... Curnow, Paul; + view all (2018) The de novo design of a biocompatible and functional integral membrane protein using minimal sequence complexity. Scientific Reports , 8 (1) , Article 14564. 10.1038/s41598-018-31964-8. Green open access

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Abstract

The de novo design of integral membrane proteins remains a major challenge in protein chemistry. Here, we describe the bottom-up design of a genetically-encoded synthetic membrane protein comprising only four amino acids (L, S, G and W) in the transmembrane domains. This artificial sequence, which we call REAMP for recombinantly expressed artificial membrane protein, is a single chain of 133 residues arranged into four antiparallel membrane-spanning α-helices. REAMP was overexpressed in Escherichia coli and localized to the cytoplasmic membrane with the intended transmembrane topology. Recombinant REAMP could be extracted from the cell membrane in detergent micelles and was robust and stable in vitro, containing helical secondary structure consistent with the original design. Engineered mono- and bis-histidine residues in the membrane domain of REAMP were able to coordinate heme in vitro, in a manner reminiscent of natural b-type cytochromes. This binding shifted the electrochemical potential of the cofactor, producing a synthetic hemoprotein capable of nascent redox catalysis. These results show that a highly reduced set of amino acids is sufficient to mimic some key properties of natural proteins, and that cellular biosynthesis is a viable route for the production of minimal de novo membrane sequences.

Type: Article
Title: The de novo design of a biocompatible and functional integral membrane protein using minimal sequence complexity
Location: England
Open access status: An open access version is available from UCL Discovery
DOI: 10.1038/s41598-018-31964-8
Publisher version: https://doi.org/10.1038/s41598-018-31964-8
Language: English
Additional information: Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
Keywords: Science & Technology, Multidisciplinary Sciences, Science & Technology - Other Topics, TRANSMEMBRANE HELICES, COMPUTATIONAL DESIGN, ELECTRON-TRANSFER, BINDING, HEME, INSERTION, RESIDUES, SYSTEM, SPECTROSCOPY, RECOGNITION
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences > Div of Medicine
URI: https://discovery.ucl.ac.uk/id/eprint/10214020
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