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Task-Aware Active Learning for Endoscopic Polyp Segmentation

Poudel, Pranav; Thapa, Shrawan Kumar; Regmi, Sudarshan; Bhattarai, Binod; Stoyanov, Danail; (2024) Task-Aware Active Learning for Endoscopic Polyp Segmentation. In: Bhattarai, B and Ali, S and Rau, A and Caramalau, R and Nguyen, A and Gyawali, P and Namburete, A and Stoyanov, D, (eds.) Data Engineering in Medical Imaging (DEMI 2024). (pp. pp. 155-165). Springer, Cham: Cham, Switzerland.

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Abstract

Semantic segmentation of polyps is one of the most important research problems in endoscopic image analysis. One of the main obstacles to researching such a problem is the lack of annotated data. Endoscopic annotations necessitate the specialist knowledge of expert endoscopists, and hence the difficulty of organizing arises along with tremendous costs in time and budget. To address this problem, we investigate an active learning paradigm to reduce the requirement of massive labelled training examples by selecting the most discriminative and diverse unlabeled examples for the task taken into consideration. To this end, we propose a task-aware active learning pipeline that considers not only the uncertainty that the current task model exhibits for a given unlabelled example but also the diversity in the composition of the acquired pool in the feature space of the model. We compare our method with the competitive baselines on two publicly available polyps segmentation benchmark datasets. We observe a significant performance improvement over the compared baselines from the experimental results. The code and implementation details are available at: https://github.com/bhattarailab/endo-active-learn

Type: Proceedings paper
Title: Task-Aware Active Learning for Endoscopic Polyp Segmentation
Event: 2nd International Workshop on Data Engineering in Medical Imaging
Location: MOROCCO, Marrakesh
Dates: 10 Oct 2024
ISBN-13: 978-3-031-73747-3
DOI: 10.1007/978-3-031-73748-0_16
Publisher version: https://doi.org/10.1007/978-3-031-73748-0_16
Language: English
Additional information: This version is the author-accepted manuscript. For information on re-use, please refer to the publisher’s terms and conditions.
Keywords: Active Learning, Computer Assisted Interventions, Semantic Segmentation, Surgical AI
UCL classification: UCL
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science > Dept of Computer Science
URI: https://discovery.ucl.ac.uk/id/eprint/10207813
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