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doped: Python toolkit for robust and repeatable charged defect supercell calculations

Kavanagh, Seán R; Squires, Alexander G; Nicolson, Adair; Mosquera-Lois, Irea; Ganose, Alex M; Zhu, Bonan; Brlec, Katarina; ... Scanlon, David O; + view all (2024) doped: Python toolkit for robust and repeatable charged defect supercell calculations. Journal of Open Source Software , 9 (96) , Article 6433. 10.21105/joss.06433. Green open access

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Abstract

Defects are a universal feature of crystalline solids, dictating the key properties and performance of many functional materials. Given their crucial importance yet inherent difficulty in measuring experimentally, computational methods (such as DFT and ML/classical force-fields) are widely used to predict defect behaviour at the atomic level and the resultant impact on macroscopic properties. Here we report doped, a Python package for the generation, pre-/post-processing, and analysis of defect supercell calculations. doped has been built to implement the defect simulation workflow in an efficient and user-friendly – yet powerful and fully-flexible – manner, with the goal of providing a robust general-purpose platform for conducting reproducible calculations of solid-state defect properties.

Type: Article
Title: doped: Python toolkit for robust and repeatable charged defect supercell calculations
Open access status: An open access version is available from UCL Discovery
DOI: 10.21105/joss.06433
Publisher version: https://doi.org/10.21105/joss.06433
Language: English
Additional information: Authors of JOSS papers retain copyright. This work is licensed under a Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/).
UCL classification: UCL
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science > Dept of Chemical Engineering
URI: https://discovery.ucl.ac.uk/id/eprint/10191270
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