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Bi-parametric prostate MR image synthesis using pathology and sequence-conditioned stable diffusion

Saeed, Shaheer U; Syer, Tom; Yan, Wen; Yang, Qianye; Emberton, Mark; Punwani, Shonit; Clarkson, Matthew John; ... Hu, Yipeng; + view all (2023) Bi-parametric prostate MR image synthesis using pathology and sequence-conditioned stable diffusion. In: Oguz, Ipek and Noble, Jack H and Li, Xiaoxiao and Styner, Martin and Baumgartner, Christian and Rusu, Mirabela and Heimann, Tobias and Kontos, Despina and Landman, Bennett A and Dawant, Benoit M, (eds.) Proceedings of Machine Learning Research. (pp. pp. 814-828). PMLR: Nashville, TN, USA. Green open access

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Abstract

We propose an image synthesis mechanism for multi-sequence prostate MR images conditioned on text, to control lesion presence and sequence, as well as to generate paired bi-parametric images conditioned on images e.g. for generating diffusion-weighted MR from T2-weighted MR for paired data, which are two challenging tasks in pathological image synthesis. Our proposed mechanism utilises and builds upon the recent stable diffusion model by proposing image-based conditioning for paired data generation. We validate our method using 2D image slices from real suspected prostate cancer patients. The realism of the synthesised images is validated by means of a blind expert evaluation for identifying real versus fake images, where a radiologist with 4 years experience reading urological MR only achieves 59.4% accuracy across all tested sequences (where chance is 50%). For the first time, we evaluate the realism of the generated pathology by blind expert identification of the presence of suspected lesions, where we find that the clinician performs similarly for both real and synthesised images, with a 2.9 percentage point difference in lesion identification accuracy between real and synthesised images, demonstrating the potentials in radiological training purposes. Furthermore, we also show that a machine learning model, trained for lesion identification, shows better performance (76.2% vs 70.4%, statistically significant improvement) when trained with real data augmented by synthesised data as opposed to training with only real images, demonstrating usefulness for model training.

Type: Proceedings paper
Title: Bi-parametric prostate MR image synthesis using pathology and sequence-conditioned stable diffusion
Event: Medical Imaging with Deep Learning (MIDL) 2023
Open access status: An open access version is available from UCL Discovery
Publisher version: http://proceedings.mlr.press/v227/
Language: English
Additional information: © 2023 CC-BY 4.0, S.U.S. , T.S. , W.Y. , Q.Y. , M.E. , S.P. , M.J.C. , D.C.B. & Y.H. .
Keywords: Stable Diffusion, Image Synthesis, MRI, Prostate.
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences > Div of Medicine
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science > Dept of Med Phys and Biomedical Eng
URI: https://discovery.ucl.ac.uk/id/eprint/10188907
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