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Orientation of the central domains of KSRP and its implications for the interaction with the RNA targets

Diaz-Moreno, I; Hollingworth, D; Kelly, G; Martin, S; Garcia-Mayoral, M; Briata, P; Gherzi, R; (2010) Orientation of the central domains of KSRP and its implications for the interaction with the RNA targets. Nucleic Acids Research , 38 (15) pp. 5193-5205. 10.1093/nar/gkq216. Green open access

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Abstract

KSRP is a multi-domain RNA-binding protein that recruits the exosome-containing mRNA degradation complex to mRNAs coding for cellular proliferation and inflammatory response factors. The selectivity of this mRNA degradation mechanism relies on KSRP recognition of AU-rich elements in the mRNA 30 UTR, that is mediated by KSRP’s KH domains. Our structural analysis shows that the inter-domain linker orients the two central KH domains of KSRP—and their RNA-binding surfaces—creating a two-domain unit. We also show that this inter-domain arrangement is important to the interaction with KSRP’s RNA targets.

Type: Article
Title: Orientation of the central domains of KSRP and its implications for the interaction with the RNA targets
Open access status: An open access version is available from UCL Discovery
DOI: 10.1093/nar/gkq216
Publisher version: http://doi.org/10.1093/nar/gkq216
Language: English
Additional information: The Author(s) 2010. Published by Oxford University Press. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/ by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Div of Biosciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Div of Biosciences > Structural and Molecular Biology
URI: https://discovery.ucl.ac.uk/id/eprint/1418596
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