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Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors

Boby, ML; Fearon, D; Ferla, M; Filep, M; Koekemoer, L; Robinson, MC; Chodera, JD; ... et, alia; + view all (2023) Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors. Science , 382 (6671) , Article eabo7201. 10.1126/science.abo7201. Green open access

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Abstract

We report the results of the COVID Moonshot, a fully open-science, crowdsourced, and structure-enabled drug discovery campaign targeting the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) main protease. We discovered a noncovalent, nonpeptidic inhibitor scaffold with lead-like properties that is differentiated from current main protease inhibitors. Our approach leveraged crowdsourcing, machine learning, exascale molecular simulations, and high-throughput structural biology and chemistry. We generated a detailed map of the structural plasticity of the SARS-CoV-2 main protease, extensive structure-activity relationships for multiple chemotypes, and a wealth of biochemical activity data. All compound designs (>18,000 designs), crystallographic data (>490 ligand-bound x-ray structures), assay data (>10,000 measurements), and synthesized molecules (>2400 compounds) for this campaign were shared rapidly and openly, creating a rich, open, and intellectual property-free knowledge base for future anticoronavirus drug discovery.

Type: Article
Title: Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors
Location: United States
Open access status: An open access version is available from UCL Discovery
DOI: 10.1126/science.abo7201
Publisher version: http://dx.doi.org/10.1126/science.abo7201
Language: English
Additional information: This version is the author accepted manuscript. For information on re-use, please refer to the publisher's terms and conditions.
UCL classification: UCL
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences > Dept of Chemistry
URI: https://discovery.ucl.ac.uk/id/eprint/10185794
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