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Etiology and Risk Factors for Mortality in an Adult Community-acquired Pneumonia Cohort in Malawi

Aston, SJ; Ho, A; Jary, H; Huwa, J; Mitchell, T; Ibitoye, S; Greenwood, S; ... Gordon, SB; + view all (2019) Etiology and Risk Factors for Mortality in an Adult Community-acquired Pneumonia Cohort in Malawi. American Journal of Respiratory and Critical Care Medicine , 200 (3) pp. 359-369. 10.1164/rccm.201807-1333OC. Green open access

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Abstract

RATIONALE: In the context of rapid antiretroviral therapy rollout and an increasing burden of noncommunicable diseases, there are few contemporary data describing the etiology and outcome of community-acquired pneumonia (CAP) in sub-Saharan Africa. OBJECTIVES: To describe the current etiology of CAP in Malawi and identify risk factors for mortality. METHODS: We conducted a prospective observational study of adults hospitalized with CAP to a teaching hospital in Blantyre, Malawi. Etiology was defined by blood culture, Streptococcus pneumoniae urinary antigen detection, sputum mycobacterial culture and Xpert MTB/RIF, and nasopharyngeal aspirate multiplex PCR. MEASUREMENTS AND MAIN RESULTS: In 459 patients (285 [62.1%] males; median age, 34.7 [interquartile range, 29.4–41.9] yr), 30-day mortality was 14.6% (64/439) and associated with male sex (adjusted odds ratio, 2.60 [95% confidence interval, 1.17–5.78]), symptom duration greater than 7 days (2.78 [1.40–5.54]), tachycardia (2.99 [1.48–6.06]), hypoxemia (4.40 [2.03–9.51]), and inability to stand (3.59 [1.72–7.50]). HIV was common (355/453; 78.4%), frequently newly diagnosed (124/355; 34.9%), but not associated with mortality. S. pneumoniae (98/458; 21.4%) and Mycobacterium tuberculosis (75/326; 23.0%) were the most frequently identified pathogens. Viral infection occurred in 32.6% (148/454) with influenza (40/454; 8.8%) most common. Bacterial–viral coinfection occurred in 9.1% (28/307). Detection of M. tuberculosis was associated with mortality (adjusted odds ratio, 2.44 [1.19–5.01]). CONCLUSION: In the antiretroviral therapy era, CAP in Malawi remains predominantly HIV associated, with a large proportion attributable to potentially vaccine-preventable pathogens. Strategies to increase early detection and treatment of tuberculosis and improve supportive care, in particular the correction of hypoxemia, should be evaluated in clinical trials to address CAP-associated mortality.

Type: Article
Title: Etiology and Risk Factors for Mortality in an Adult Community-acquired Pneumonia Cohort in Malawi
Location: United States
Open access status: An open access version is available from UCL Discovery
DOI: 10.1164/rccm.201807-1333OC
Publisher version: https://doi.org/10.1164/rccm.201807-1333OC
Language: English
Additional information: © 2019 American Thoracic Society. This article is open access and distributed under the terms of the Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/).
Keywords: Africa south of the Sahara, HIV, community-acquired pneumonia, pulmonary tuberculosis
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences > Div of Infection and Immunity
URI: https://discovery.ucl.ac.uk/id/eprint/10079360
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