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100,000 Genomes Project Pilot Investigators; Smedley, D; Smith, KR; Martin, A; Thomas, EA; McDonagh, EM; Cipriani, V; ... Caulfield, M; + view all (2021) 100,000 Genomes Pilot on Rare-Disease Diagnosis in Health Care — Preliminary Report. New England Journal of Medicine , 385 (20) pp. 1868-1880. 10.1056/NEJMoa2035790. Green open access
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Adams, HHH; Hibar, DP; Chouraki, V; Stein, JL; Nyquist, PA; Renteria, ME; Trompet, S; ... Thompson, PM; + view all (2016) Novel genetic loci underlying human intracranial volume identified through genome-wide association. Nature Neuroscience , 19 (12) pp. 1569-1582. 10.1038/nn.4398. Green open access
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Altmann, A; Ryten, M; Di Nunzio, M; Ravizza, T; Tolomeo, D; Reynolds, RH; Somani, A; ... Sisodiya, SM; + view all (2021) A systems-level analysis highlights microglial activation as a modifying factor in common epilepsies. Neuropathology and Applied Neurobiology 10.1111/nan.12758. (In press). Green open access
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Altmann, A; Cash, DM; Bocchetta, M; Heller, C; Reynolds, R; Moore, K; Convery, RS; ... Rohrer, JD; + view all (2020) Analysis of brain atrophy and local gene expression in genetic frontotemporal dementia. Brain Communications 10.1093/braincomms/fcaa122. (In press). Green open access
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Andersen, MS; Bandres-Ciga, S; Reynolds, RH; Hardy, J; Ryten, M; Krohn, L; Gan-Or, Z; ... Pihlstrøm, L; + view all (2021) Heritability enrichment implicates microglia in Parkinson's disease pathogenesis. Annals of Neurology , 89 (5) pp. 942-951. 10.1002/ana.26032. Green open access
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Anttila, V; Bulik-Sullivan, B; Finucane, HK; Walters, RK; Bras, J; Duncan, L; Escott-Price, V; ... Neale, BM; + view all (2018) Analysis of shared heritability in common disorders of the brain. Science , 360 (6395) , Article eaap8757. 10.1126/science.aap8757. Green open access
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Bacq, A; Roussel, D; Bonduelle, T; Zagaglia, S; Maletic, M; Ribierre, T; Adle-Biassette, H; ... Baulac, S; + view all (2022) Cardiac investigations in sudden unexpected death in DEPDC5-related epilepsy. Annals of Neurology , 91 (1) pp. 101-116. 10.1002/ana.26256. Green open access
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Bandres-Ciga, S; Ahmed, S; Sabir, MS; Blauwendraat, C; Adarmes-Gomez, AD; Bernal-Bernal, I; Bonilla-Toribio, M; ... Singleton, A; + view all (2019) The Genetic Architecture of Parkinson Disease in Spain: Characterizing Population-Specific Risk, Differential Haplotype Structures, and Providing Etiologic Insight. Movement Disorders 10.1002/mds.27864. (In press).

Bandres-Ciga, S; Saez-Atienzar, S; Bonet-Ponce, L; Billingsley, K; Vitale, D; Blauwendraat, C; Gibbs, JR; ... Singleton, AB; + view all (2019) The endocytic membrane trafficking pathway plays a major role in the risk of Parkinson's disease. Movement Disorders , 34 (4) pp. 460-468. 10.1002/mds.27614.

Bayat, A; Knaus, A; Juul, AW; Dukic, D; Gardella, E; Charzewska, A; Clement, E; ... DDD Study Group, .; + view all (2019) PIGT-CDG, a disorder of the glycosylphosphatidylinositol anchor: description of 13 novel patients and expansion of the clinical characteristics. Genetics in Medicine , 21 pp. 2216-2223. 10.1038/s41436-019-0512-3. Green open access
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Bettencourt, C; Forabosco, P; Wiethoff, S; Heidari, M; Johnstone, DM; Botía, JA; Collingwood, JF; ... Houlden, H; + view all (2016) Gene co-expression networks shed light into diseases of brain iron accumulation. Neurobiology of Disease , 87 pp. 59-68. 10.1016/j.nbd.2015.12.004. Green open access
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Billingsley, KJ; Ding, J; Jerez, PA; Illarionova, A; Levine, K; Grenn, FP; Makarious, MB; ... Singleton, AB; + view all (2023) Genome-Wide Analysis of Structural Variants in Parkinson Disease. Annals of Neurology 10.1002/ana.26608. (In press). Green open access
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Billingsley, KJ; Barbosa, IA; Bandrés-Ciga, S; Quinn, JP; Bubb, VJ; Deshpande, C; Botia, JA; ... Koks, S; + view all (2019) Mitochondria function associated genes contribute to Parkinson's Disease risk and later age at onset. npj Parkinson's Disease , 5 , Article 8. 10.1038/s41531-019-0080-x. Green open access
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Blauwendraat, C; Iwaki, H; Makarious, MB; Bandres-Ciga, S; Leonard, H; Grenn, FP; Lake, J; ... Lynch, TL; + view all (2021) Investigation of Autosomal Genetic Sex Differences in Parkinson's disease. Annals of Neurology , 90 (1) pp. 35-42. 10.1002/ana.26090. Green open access
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Blauwendraat, C; Faghri, F; Pihlstrom, L; Geiger, JT; Elbaz, A; Lesage, S; Corvol, J-C; ... Scholz, S; + view all (2017) NeuroChip, an updated version of the NeuroX genotyping platform to rapidly screen for variants associated with neurological diseases. Neurobiology of Aging , 57 247.e9-247.e13. 10.1016/j.neurobiolaging.2017.05.009. Green open access
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Blauwendraat, C; Kia, DA; Pihlstrom, L; Gan-Or, Z; Lesage, S; Gibbs, JR; Ding, J; ... Wood, NW; + view all (2018) Insufficient evidence for pathogenicity of SNCA His50Gln (H50Q) in Parkinson's disease. Neurobiology of Aging , 64 159.e5-159.e8. 10.1016/j.neurobiolaging.2017.12.012. Green open access
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Blauwendraat, C; Reed, X; Kia, DA; Gan-Or, Z; Lesage, S; Pihlstrøm, L; Guerreiro, R; ... COURAGE-PD (Comprehensive Unbiased Risk Factor Assessment for Ge; + view all (2018) Frequency of Loss of Function Variants in LRRK2 in Parkinson Disease. JAMA Neurology 10.1001/jamaneurol.2018.1885. (In press).

Botía, JA; Vandrovcova, J; Forabosco, P; Guelfi, S; D'Sa, K; United Kingdom Brain Expression Consortium, .; Hardy, J; ... Weale, ME; + view all (2017) An additional k-means clustering step improves the biological features of WGCNA gene co-expression networks. BMC Systems Biology , 11 , Article 47. 10.1186/s12918-017-0420-6. Green open access
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Charlesworth, G; Angelova, PR; Bartolomé-Robledo, F; Ryten, M; Trabzuni, D; Stamelou, M; Abramov, AY; ... Wood, NW; + view all (2015) Mutations in HPCA cause autosomal-recessive primary isolated dystonia. American Journal of Human Genetics , 96 (4) pp. 657-665. 10.1016/j.ajhg.2015.02.007. Green open access
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Charlesworth, G; Plagnol, V; Holmström, KM; Bras, J; Sheerin, UM; Preza, E; Rubio-Agusti, I; ... Wood, NW; + view all (2012) Mutations in ANO3 cause dominant craniocervical dystonia: ion channel implicated in pathogenesis. The American Journal of Human Genetics , 91 (6) 1041 - 1050. 10.1016/j.ajhg.2012.10.024. Green open access
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Chelban, V; Patel, N; Vandrovcova, J; Zanetti, MN; Lynch, DS; Ryten, M; Botia, JA; ... Houlden, H; + view all (2017) Mutations in NKX6-2 Cause Progressive Spastic Ataxia and Hypomyelination. American Journal of Human Genetics , 100 (6) pp. 969-977. 10.1016/j.ajhg.2017.05.009. Green open access
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Chelban, V; Wilson, MP; Warman Chardon, J; Vandrovcova, J; Zanetti, MN; Zamba-Papanicolaou, E; Efthymiou, S; ... SYNaPS Study Group, .; + view all (2019) PDXK mutations cause polyneuropathy responsive to PLP supplementation. Annals of Neurology 10.1002/ana.25524. (In press). Green open access
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Chen, Z; Maroofian, R; Başak, AN; Shingavi, L; Karakaya, M; Efthymiou, S; Gustavsson, EK; ... Sarraf, P; + view all (2021) Novel variants broaden the phenotypic spectrum of PLEKHG5-associated neuropathies. European Journal of Neurology , 28 (4) pp. 1344-1355. 10.1111/ene.14649. Green open access
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Chen, Z; Ryten, M; Houlden, H; (2020) Reply to: No evidence supports genetic heterogeneity of neuronal intranuclear inclusion disease. Annals of Clinical and Translational Neurology , 7 (12) pp. 2544-2545. 10.1002/acn3.51222. Green open access
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Chen, Z; Yan Yau, W; Jaunmuktane, Z; Tucci, A; Sivakumar, P; Gagliano Taliun, SA; Turner, C; ... Houlden, H; + view all (2020) Neuronal intranuclear inclusion disease is genetically heterogeneous. Annals of Clinical and Translational Neurology , 7 (9) pp. 1716-1725. 10.1002/acn3.51151. Green open access
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Chen, Zhongbo; Morris, Huw R; Polke, James; Wood, Nicholas W; Gandhi, Sonia; Ryten, Mina; Houlden, Henry; (2024) Repeat expansion disorders. Practical Neurology 10.1136/pn-2023-003938. (In press). Green open access
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Chen, Z; Zhang, D; Reynolds, RH; Gustavsson, EK; García-Ruiz, S; D'Sa, K; Fairbrother-Browne, A; ... Ryten, M; + view all (2021) Human-lineage-specific genomic elements are associated with neurodegenerative disease and APOE transcript usage. Nature Communications , 12 , Article 2076. 10.1038/s41467-021-22262-5. Green open access
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Chia, R; Sabir, MS; Bandres-Ciga, S; Saez-Atienzar, S; Reynolds, RH; Gustavsson, E; Walton, RL; ... Scholz, SW; + view all (2021) Genome sequencing analysis identifies new loci associated with Lewy body dementia and provides insights into its genetic architecture. Nature Genetics , 53 pp. 294-30353. 10.1038/s41588-021-00785-3. Green open access
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Cipriani, V; Vestito, L; Magavern, EF; Jacobsen, JOB; Arno, G; Behr, ER; Benson, KA; ... Smedley, D; + view all (2025) Rare disease gene association discovery in the 100,000 Genomes Project. Nature 10.1038/s41586-025-08623-w. (In press). Green open access
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Collier, JJ; Guissart, C; Oláhová, M; Sasorith, S; Piron-Prunier, F; Suomi, F; Zhang, D; ... Taylor, RW; + view all (2021) Developmental Consequences of Defective ATG7-Mediated Autophagy in Humans. New England Journal of Medicine , 384 (25) pp. 2406-2417. 10.1056/NEJMoa1915722. Green open access
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D'Sa, Karishma; Guelfi, Sebastian; Vandrovcova, Jana; Reynolds, Regina H; Zhang, David; Hardy, John; Botía, Juan A; ... Ryten, Mina; + view all (2023) Analysis of subcellular RNA fractions demonstrates significant genetic regulation of gene expression in human brain post-transcriptionally. Scientific Reports , 13 (1) , Article 13874. 10.1038/s41598-023-40324-0. Green open access
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Devine, MJ; Kaganovich, A; Ryten, M; Mamais, A; Trabzuni, D; Manzoni, C; McGoldrick, P; ... Lewis, PA; + view all (2012) Correction: Pathogenic LRRK2 Mutations Do Not Alter Gene Expression in Cell Model Systems or Human Brain Tissue. PLOS ONE , 7 (1) , Article e22489. 10.1371/annotation/c12e4f9e-5aae-424b-a69f-fddf16976dc5. Green open access
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Devine, MJ; Kaganovich, A; Ryten, M; Mamais, A; Trabzuni, D; Manzoni, C; McGoldrick, P; ... Lewis, PA; + view all (2011) Pathogenic LRRK2 Mutations Do Not Alter Gene Expression in Cell Model Systems or Human Brain Tissue. PLOS ONE , 6 (7) , Article e22489. 10.1371/journal.pone.0022489. Green open access
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Dewan, R; Chia, R; Ding, J; Hickman, RA; Stein, TD; Abramzon, Y; Ahmed, S; ... Traynor, BJ; + view all (2021) Pathogenic Huntingtin Repeat Expansions in Patients with Frontotemporal Dementia and Amyotrophic Lateral Sclerosis. Neuron , 109 (3) 448-460.e4. 10.1016/j.neuron.2020.11.005. Green open access
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Efthymiou, S; Salpietro, V; Malintan, N; Poncelet, M; Kriouile, Y; Fortuna, S; De Zorzi, R; ... Houlden, H; + view all (2019) Biallelic mutations in neurofascin cause neurodevelopmental impairment and peripheral demyelination. Brain , 142 (10) pp. 2948-2964. 10.1093/brain/awz248. Green open access
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Fairbrother-Browne, A; Ali, AT; Reynolds, RH; Garcia-Ruiz, S; Zhang, D; Chen, Z; Ryten, M; (2021) Mitochondrial-nuclear cross-talk in the human brain is modulated by cell type and perturbed in neurodegenerative disease. Communications Biology , 4 (1) , Article 1262. 10.1038/s42003-021-02792-w. Green open access
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Fairbrother-Browne, Aine; García-Ruiz, Sonia; Hertfelder Reynolds, Regina; Ryten, Mina; Hodgkinson, Alan; (2023) ensemblQueryR: fast, flexible and high-throughput querying of Ensembl LD API endpoints in R. GigaByte , 2023 pp. 1-10. 10.46471/gigabyte.91. Green open access
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Feleke, R; Reynolds, RH; Smith, AM; Tilley, B; Taliun, SAG; Hardy, J; Matthews, PM; ... Ryten, M; + view all (2021) Cross-platform transcriptional profiling identifies common and distinct molecular pathologies in Lewy body diseases. Acta Neuropathologica 10.1007/s00401-021-02343-x. (In press). Green open access
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Ferrari, R; Forabosco, P; Vandrovcova, J; Botía, JA; Guelfi, S; Warren, JD; UK Brain Expression Consortium (UKBEC); ... Hardy, J; + view all (2016) Frontotemporal dementia: insights into the biological underpinnings of disease through gene co-expression network analysis. Molecular Neurodegeneration , 11 , Article 21. 10.1186/s13024-016-0085-4. Green open access
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Forabosco, P; Ramasamy, A; Trabzuni, D; Walker, R; Smith, C; Bras, J; Levine, AP; ... Ryten, M; + view all (2013) Insights into TREM2 biology by network analysis of human brain gene expression data. Neurobiol Aging , 34 (12) pp. 2699-2714. 10.1016/j.neurobiolaging.2013.05.001. Green open access
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Franke, B; Stein, JL; Ripke, S; Anttila, V; Hibar, DP; van Hulzen, KJ; Arias-Vasquez, A; ... Sullivan, PF; + view all (2016) Genetic influences on schizophrenia and subcortical brain volumes: large-scale proof of concept. Nature Neuroscience , 19 (3) pp. 420-431. 10.1038/nn.4228. Green open access
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Freeman, TM; Wang, D; Harris, J; Ambrose, JC; Arumugam, P; Baple, EL; Bleda, M; ... Zarowiecki, M; + view all (2020) Genomic loci susceptible to systematic sequencing bias in clinical whole genomes. Genome Research , 30 (3) pp. 415-426. 10.1101/gr.255349.119. Green open access
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Fu, Bin; Brock, Emma E; Andrews, Rebecca; Breiter, Jonathan C; Tian, Ru; Toomey, Christina E; Lachica, Joanne; ... Lee, Steven F; + view all (2024) RASP: Optimal Single Puncta Detection in Complex Cellular Backgrounds. The Journal of Physical Chemistry B , 128 (15) pp. 3585-3597. 10.1021/acs.jpcb.4c00174. Green open access
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Gagliano, SA; Pouget, JG; Hardy, J; Knight, J; Barnes, MR; Ryten, M; Weale, ME; (2016) Genomics implicates adaptive and innate immunity in Alzheimer's and Parkinson's diseases. Annals of Clinical and Translational Neurology , 3 (12) pp. 924-933. 10.1002/acn3.369. Green open access
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García-Ruiz, Sonia; Gustavsson, Emil K; Zhang, David; Reynolds, Regina H; Chen, Zhongbo; Fairbrother-Browne, Aine; Gil-Martínez, Ana Luisa; ... Ryten, Mina; + view all (2022) IntroVerse: a comprehensive database of introns across human tissues. Nucleic Acids Research 10.1093/nar/gkac1056. (In press). Green open access
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García-Ruiz, Sonia; Reynolds, Regina Hertfelder; Grant-Peters, Melissa; Gustavsson, Emil Karl; Fairbrother-Browne, Aine; Chen, Zhongbo; Brenton, Jonathan William; (2023) aws-s3-integrity-check: an open-source bash tool to verify the integrity of a dataset stored on Amazon S3. GigaByte , 2023 , Article gigabyte87. 10.46471/gigabyte.87. Green open access
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García-Ruiz, S; Gil-Martínez, AL; Cisterna, A; Jurado-Ruiz, F; Reynolds, RH; NABEC (North America Brain Expression Consortium), .; Cookson, MR; ... Botía, JA; + view all (2021) CoExp: A Web Tool for the Exploitation of Co-expression Networks. Frontiers in Gentics , 12 , Article 630187. 10.3389/fgene.2021.630187. Green open access
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Geissler, JM; International Parkinson Disease Genomics Consortium members; Romanos, M; Gerlach, M; Berg, D; Schulte, C; (2017) No genetic association between attention-deficit/hyperactivity disorder (ADHD) and Parkinson’s disease in nine ADHD candidate SNPs. ADHD Attention Deficit and Hyperactivity Disorders , 9 (2) pp. 121-127. 10.1007/s12402-017-0219-8. Green open access
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Gibson, Joel T; Sadeghi-Alavijeh, Omid; Gale, Daniel P; Rothe, Hansjörg; Genomics England Research Consortium; Savige, Judy; (2022) Pathogenicity of missense variants affecting the collagen IV α5 carboxy non-collagenous domain in X-linked Alport syndrome. Scientific Reports , 12 , Article 11257. 10.1038/s41598-022-14928-x. Green open access
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Guelfi, S; Botia, JA; Thom, M; Ramasamy, A; Perona, M; Stanyer, L; Martinian, L; ... Matarin, M; + view all (2019) Transcriptomic and genetic analyses reveal potential causal drivers for intractable partial epilepsy. Brain , 142 (6) pp. 1616-1630. 10.1093/brain/awz074. Green open access
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Guelfi, S; D'Sa, K; Botía, JA; Vandrovcova, J; Reynolds, RH; Zhang, D; Trabzuni, D; ... Ryten, M; + view all (2020) Regulatory sites for splicing in human basal ganglia are enriched for disease-relevant information. Nature Communications , 11 , Article 1041. 10.1038/s41467-020-14483-x. Green open access
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Gustavsson, Emil K; Zhang, David; Reynolds, Regina H; Garcia-Ruiz, Sonia; Ryten, Mina; (2022) ggtranscript: an R package for the visualization and interpretation of transcript isoforms using ggplot2. Bioinformatics 10.1093/bioinformatics/btac409. (In press). Green open access
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Heidari, M; Gerami, SH; Bassett, B; Graham, RM; Chua, ACG; Aryal, R; House, MJ; ... Milward, EA; + view all (2016) Pathological relationships involving iron and myelin may constitute a shared mechanism linking various rare and common brain diseases. Rare Diseases , 4 (1) , Article e1198458. 10.1080/21675511.2016.1198458. Green open access
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Heidari, M; Johnstone, DM; Bassett, B; Graham, RM; Chua, AC; House, MJ; Collingwood, JF; ... Milward, EA; + view all (2016) Brain iron accumulation affects myelin-related molecular systems implicated in a rare neurogenetic disease family with neuropsychiatric features. Molecular Psychiatry , 21 pp. 1599-1607. 10.1038/mp.2015.192. Green open access
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Hernandez, DG; Nalls, MA; Moore, M; Chong, S; Dillman, A; Trabzuni, D; Gibbs, JR; ... Cookson, MR; + view all (2012) Integration of GWAS SNPs and tissue specific expression profiling reveal discrete eQTLs for human traits in blood and brain. Neurobiology of Disease , 47 (1) 20 - 28. 10.1016/j.nbd.2012.03.020. Green open access
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Hibar, DP; Adams, HH; Jahanshad, N; Chauhan, G; Stein, JL; Hofer, E; Renteria, ME; ... Ikram, MA; + view all (2017) Novel genetic loci associated with hippocampal volume. Nature Communications , 8 , Article 13624. 10.1038/ncomms13624. Green open access
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Hicks, Amy R; Reynolds, Regina H; O'Callaghan, Ben; Garcia Ruiz, Sonia; Gil Martinez, Ana Luisa; Botia, Juan; Plun-Favreau, Helene; (2023) The non-specific lethal complex regulates genes and pathways genetically linked to Parkinson’s disease. Brain , Article awad246. 10.1093/brain/awad246. (In press). Green open access
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Hong, Y; Nanthapisal, S; Omoyinmi, E; Olbrich, P; Neth, O; Speckmann, C; Lucena, JM; ... Brogan, P; + view all (2019) Secondary C1q Deficiency in Activated PI3Kδ Syndrome Type 2. Frontiers in Immunology , 10 , Article 2589. 10.3389/fimmu.2019.02589. Green open access
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Hughes, CD; Choi, ML; Ryten, M; Hopkins, L; Drews, A; Botía, JA; Iljina, M; ... Klenerman, D; + view all (2019) Picomolar concentrations of oligomeric alpha-synuclein sensitizes TLR4 to play an initiating role in Parkinson's disease pathogenesis. Acta Neuropathologica , 137 (1) pp. 103-120. 10.1007/s00401-018-1907-y. Green open access
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Huuki-Myers, Louise A; Spangler, Abby; Eagles, Nicholas J; Montgomery, Kelsey D; Kwon, Sang Ho; Guo, Boyi; Grant-Peters, Melissa; ... PsychENCODE Consortium; + view all (2024) A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex. Science , 384 (6698) , Article ARTN eadh1938. 10.1126/science.adh1938. Green open access
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Ip, HF; Jansen, R; Abdellaoui, A; Bartels, M; UK Brain Expression Consortium, .; Boomsma, DI; Nivard, MG; (2018) Characterizing the Relation Between Expression QTLs and Complex Traits: Exploring the Role of Tissue Specificity. Behavior Genetics , 48 (5) pp. 374-385. 10.1007/s10519-018-9914-2. Green open access
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Jabbari, E; Koga, S; Valentino, R; Reynolds, R; Ferrari, R; Tan, M; Rowe, J; ... Morris, H; + view all (2021) Genetic determinants of survival in progressive supranuclear palsy: a genome-wide association study. The Lancet Neurology , 20 (2) pp. 107-116. 10.1016/S1474-4422(20)30394-X. Green open access
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Jabbari, E; Woodside, J; Tan, MMX; Shoai, M; Pittman, A; Ferrari, R; Mok, KY; ... Morris, HR; + view all (2018) Variation at the TRIM11 locus modifies progressive supranuclear palsy phenotype. Annals of Neurology , 84 (4) pp. 485-496. 10.1002/ana.25308. Green open access
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Jansen, IE; Ye, H; Heetveld, S; Lechler, MC; Michels, H; Seinstra, RI; Lubbe, SJ; ... Heutink, P; + view all (2017) Discovery and functional prioritization of Parkinson's disease candidate genes from large-scale whole exome sequencing. Genome Biology , 18 , Article 22. 10.1186/s13059-017-1147-9. Green open access
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Jones, CL; Degasperi, A; Grandi, V; Amarante, TD; Genomics England Research Consortium, .; Mitchell, TJ; Nik-Zainal, S; (2021) Spectrum of mutational signatures in T-cell lymphoma reveals a key role for UV radiation in cutaneous T-cell lymphoma. Scientific Reports , 11 (1) , Article 3962. 10.1038/s41598-021-83352-4. Green open access
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Kaivola, K; Shah, Z; Chia, R; Black, SE; Gan-Or, Z; Keith, J; Masellis, M; ... Scholz, SW; + view all (2022) Genetic evaluation of dementia with Lewy bodies implicates distinct disease subgroups. Brain , 145 (5) pp. 1757-1762. 10.1093/brain/awab402. Green open access
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Kaplanis, J; Samocha, KE; Wiel, L; Zhang, Z; Arvai, KJ; Eberhardt, RY; Gallone, G; ... Retterer, K; + view all (2020) Evidence for 28 genetic disorders discovered by combining healthcare and research data. Nature , 586 (7831) pp. 757-762. 10.1038/s41586-020-2832-5. Green open access
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Kara, E; Crimi, A; Wiedmer, A; Emmenegger, M; Manzoni, C; Bandres-Ciga, S; D'Sa, K; ... Aguzzi, A; + view all (2021) An integrated genomic approach to dissect the genetic landscape regulating the cell-to-cell transfer of α-synuclein. Cell Reports , 35 (10) , Article 109189. 10.1016/j.celrep.2021.109189. Green open access
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Kasperaviciute, D; Catarino, CB; Matarin, M; Leu, C; Novy, J; Tostevin, A; Leal, B; ... Sisodiya, SM; + view all (2013) Epilepsy, hippocampal sclerosis and febrile seizures linked by common genetic variation around SCN1A. Brain: A Journal of Neurology , 136 (10) pp. 3140-3150. 10.1093/brain/awt233. Green open access
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Kerimov, Nurlan; Tambets, Ralf; Hayhurst, James D; Rahu, Ida; Kolberg, Peep; Raudvere, Uku; Kuzmin, Ivan; ... Alasoo, Kaur; + view all (2023) eQTL Catalogue 2023: New datasets, X chromosome QTLs, and improved detection and visualisation of transcript-level QTLs. PLoS Genetics , 19 (9) , Article e1010932. 10.1371/journal.pgen.1010932. Green open access
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Kia, DA; Zhang, D; Guelfi, S; Manzoni, C; Hubbard, L; Reynolds, RH; Botía, J; ... Botiá, JA; + view all (2021) Identification of Candidate Parkinson Disease Genes by Integrating Genome-Wide Association Study, Expression, and Epigenetic Data Sets. JAMA Neurology , 78 (4) pp. 464-472. 10.1001/jamaneurol.2020.5257. Green open access
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Klebe, S; Golmard, JL; Nalls, MA; Saad, M; Singleton, AB; Bras, JM; Hardy, J; ... Wood, NW; + view all (2013) The Val158Met COMT polymorphism is a modifier of the age at onset in Parkinson's disease with a sexual dimorphism. Journal of Neurology, Neurosurgery and Psychiatry , 84 (6) 666 - 673. 10.1136/jnnp-2012-304475. Green open access
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Lerner, S; Eilam, R; Adler, L; Baruteau, J; Kreiser, T; Tsoory, M; Brandis, A; ... Erez, A; + view all (2021) ASL expression in ALDH1A1+ neurons in the substantia nigra metabolically contributes to neurodegenerative phenotype. Human Genetics 10.1007/s00439-021-02345-5. (In press). Green open access
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Lobanov, Sergey V; McAllister, Branduff; McDade-Kumar, Mia; Landwehrmeyer, G Bernhard; Orth, Michael; Rosser, Anne E; REGISTRY Investigators of the European Huntington’s disease netw; ... Jones, Lesley; + view all (2022) Huntington's disease age at motor onset is modified by the tandem hexamer repeat in TCERG1. npj Genomic Medicine , 7 (1) , Article 53. 10.1038/s41525-022-00317-w. Green open access
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Lona-Durazo, Frida; Reynolds, Regina H; Scholz, Sonja W; Ryten, Mina; Gagliano Taliun, Sarah A; (2023) Regional genetic correlations highlight relationships between neurodegenerative disease loci and the immune system. Communications Biology , 6 , Article 729. 10.1038/s42003-023-05113-5. Green open access
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Luo, Huihui; Gustavsson, Emil K; Macpherson, Hannah; Dominik, Natalia; Zhelcheska, Kristina; Montgomery, Kylie; Anderson, Claire; ... Chen, Zhongbo; + view all (2024) Letter to the editor on: Hornerin deposits in neuronal intranuclear inclusion disease: direct identification of proteins with compositionally biased regions in inclusions by Park et al. (2022). Acta Neuropathol Commun , 12 (1) , Article 2. 10.1186/s40478-023-01706-7. Green open access
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Magusali, N; Graham, AC; Piers, TM; Panichnantakul, P; Yaman, U; Shoai, M; Reynolds, RH; ... Salih, DA; + view all (2021) A genetic link between risk for Alzheimer's disease and severe COVID-19 outcomes via the OAS1 gene. Brain 10.1093/brain/awab337. (In press). Green open access
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Makarious, Mary B; Lake, Julie; Pitz, Vanessa; Fu, Allen Ye; Guidubaldi, Joseph L; Solsberg, Caroline Warly; Bandres-Ciga, Sara; ... Blauwendraat, Cornelis; + view all (2023) Large-scale rare variant burden testing in Parkinson's disease. Brain , 146 (11) pp. 4622-4632. 10.1093/brain/awad214. Green open access
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Martin, HC; Gardner, EJ; Samocha, KE; Kaplanis, J; Akawi, N; Sifrim, A; Eberhardt, RY; ... Davidson, R; + view all (2021) The contribution of X-linked coding variation to severe developmental disorders. Nature Communications , 12 (1) , Article 627. 10.1038/s41467-020-20852-3. (In press). Green open access
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Martínez Carrasco, Alejandro; Real, Raquel; Lawton, Michael; Hertfelder Reynolds, Regina; Tan, Manuela; Wu, Lesley; Williams, Nigel; ... Morris, Huw R; + view all (2023) Genome-wide Analysis of Motor Progression in Parkinson Disease. Neurology Genetics , 9 (5) , Article e200092. 10.1212/NXG.0000000000200092. Green open access
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Mencacci, NE; Erro, R; Wiethoff, S; Hersheson, J; Ryten, M; Balint, B; Ganos, C; ... Bhatia, KP; + view all (2015) ADCY5 mutations are another cause of benign hereditary chorea. Neurology , 85 (1) pp. 80-88. 10.1212/WNL.0000000000001720. Green open access
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Mencacci, NE; Reynolds, R; Ruiz, SG; Vandrovcova, J; Forabosco, P; Sánchez-Ferrer, A; Volpato, V; ... Ryten, M; + view all (2020) Dystonia genes functionally converge in specific neurons and share neurobiology with psychiatric disorders. Brain , Article awaa217. 10.1093/brain/awaa217. (In press). Green open access
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Mencacci, NE; Rubio-Agusti, I; Zdebik, A; Asmus, F; Ludtmann, MH; Ryten, M; Plagnol, V; ... Wood, NW; + view all (2015) A missense mutation in KCTD17 causes autosomal dominant myoclonus-dystonia. Am J Hum Genet , 96 (6) pp. 938-947. 10.1016/j.ajhg.2015.04.008. Green open access
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Moreno-Ruiz, N; Ambrose, JC; Arumugam, P; Baple, EL; Bleda, M; Boardman-Pretty, F; Boissiere, JM; ... Casals, F; + view all (2022) Assessing the digenic model in rare disorders using population sequencing data. European Journal of Human Genetics 10.1038/s41431-022-01191-x. (In press). Green open access
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Nalls, MA; Blauwendraat, C; Vallerga, CL; Heilbron, K; Bandres-Ciga, S; Chang, D; Tan, M; ... Guerreiro, R; + view all (2019) Identification of novel risk loci, causal insights, and heritable risk for Parkinson's disease: a meta-analysis of genome-wide association studies. The Lancet Neurology , 18 (12) pp. 1091-1102. 10.1016/S1474-4422(19)30320-5. Green open access
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Noyce, A; (2020) Large-scale pathway specific polygenic risk and transcriptomic community network analysis identifies novel functional pathways in Parkinson disease. Acta Neuropathologica , 140 pp. 341-358. 10.1007/s00401-020-02181-3. Green open access
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Owen, N; Toms, M; Young, RM; Eintracht, J; Sarkar, H; Brooks, BP; Moosajee, M; ... Zarowiecki, M; + view all (2022) Identification of 4 novel human ocular coloboma genes ANK3, BMPR1B, PDGFRA, and CDH4 through evolutionary conserved vertebrate gene analysis. Genetics in Medicine 10.1016/j.gim.2021.12.014. (In press). Green open access
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Park, Bo-Yong; Larivière, Sara; Rodríguez-Cruces, Raul; Royer, Jessica; Tavakol, Shahin; Wang, Yezhou; Caciagli, Lorenzo; ... Bernhardt, Boris C; + view all (2021) Topographic divergence of atypical cortical asymmetry and atrophy patterns in temporal lobe epilepsy. Brain 10.1093/brain/awab417. (In press). Green open access
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Park, Joohyun; Tucci, Arianna; Cipriani, Valentina; Demidov, German; Rocca, Clarissa; Senderek, Jan; Butryn, Michaela; ... Hengel, Holger; + view all (2022) Heterozygous UCHL1 loss-of-function variants cause a neurodegenerative disorder with spasticity, ataxia, neuropathy, and optic atrophy. Genetics in Medicine , 24 (10) pp. 2079-2090. 10.1016/j.gim.2022.07.006. Green open access
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Parry, DA; Martin, CA; Greene, P; Marsh, JA; Ambrose, JC; Arumugam, P; Baple, EL; ... Jackson, AP; + view all (2020) Heterozygous lamin B1 and lamin B2 variants cause primary microcephaly and define a novel laminopathy. Genetics in Medicine 10.1038/s41436-020-00980-3. (In press). Green open access
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Plagnol, V; Nalls, MA; Bras, JM; Hernandez, DG; Sharma, M; Sheerin, UM; Saad, M; ... WTCCC2; + view all (2011) A Two-Stage Meta-Analysis Identifies Several New Loci for Parkinson's Disease. PLoS Genetics , 7 (6) , Article e1002142. 10.1371/journal.pgen.1002142. Green open access
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Poulter, JA; Gravett, MSC; Taylor, RL; Fujinami, K; De Zaeytijd, J; Bellingham, J; Rehman, AU; ... Inglehearn, CF; + view all (2020) New variants and in silico analyses in GRK1 associated Oguchi disease. Human Mutation 10.1002/humu.24140. (In press). Green open access
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Ramasamy, A; Trabzuni, D; Gibbs, JR; Dillman, A; Hernandez, DG; Arepalli, S; Walker, R; ... Weale, ME; + view all (2013) Resolving the polymorphism-in-probe problem is critical for correct interpretation of expression QTL studies. Nucleic Acids Research , 41 (7) , Article e88. 10.1093/nar/gkt069. Green open access
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Real, Raquel; Martinez-Carrasco, Alejandro; Reynolds, Regina H; Lawton, Michael A; Tan, Manuela MX; Shoai, Maryam; Corvol, Jean-Christophe; ... Morris, Huw R; + view all (2022) Association between the LRP1B and APOE loci in the development of Parkinson's disease dementia. Brain , Article awac414. 10.1093/brain/awac414. (In press). Green open access
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Reynolds, Regina H; Wagen, Aaron Z; Lona-Durazo, Frida; Scholz, Sonja W; Shoai, Maryam; Hardy, John; Gagliano Taliun, Sarah A; (2023) Local genetic correlations exist among neurodegenerative and neuropsychiatric diseases. npj Parkinson's Disease , 9 , Article 70. 10.1038/s41531-023-00504-1. Green open access
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Reynolds, RH; Botía, J; Nalls, MA; International Parkinson’s Disease Genomics Consortium (IPDGC), .; System Genomics of Parkinson’s Disease (SGPD), .; Hardy, J; Gagliano Taliun, SA; (2019) Moving beyond neurons: the role of cell type-specific gene regulation in Parkinson's disease heritability. NPJ Parkinson's Disease , 5 , Article 6. 10.1038/s41531-019-0076-6. Green open access
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Reynolds, RH; Hardy, J; Ryten, M; Gagliano Taliun, SA; (2019) Informing disease modelling with brain-relevant functional genomic annotations. Brain 10.1093/brain/awz295. (In press). Green open access
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Robak, LA; Jansen, IE; van Rooij, J; Uitterlinden, AG; Kraaij, R; Jankovic, J; Heutink, P; (2017) Excessive burden of lysosomal storage disorder gene variants in Parkinson's disease. Brain , 140 (12) pp. 3191-3203. 10.1093/brain/awx285. Green open access
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Saez-Atienzar, S; Bandres-Ciga, S; Langston, RG; Kim, JJ; Choi, SW; Reynolds, RH; International ALS Genomics Consortium; ... Traynor, BJ; + view all (2021) Genetic analysis of amyotrophic lateral sclerosis identifies contributing pathways and cell types. Science Advances , 7 (3) , Article eabd9036. 10.1126/sciadv.abd9036. Green open access
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Salih, Ahmed; Ardissino, Maddalena; Wagen, Aaron Z; Bard, Andrew; Szabo, Liliana; Ryten, Mina; Petersen, Steffen E; ... Raisi‐Estabragh, Zahra; + view all (2023) Genome‐Wide Association Study of Pericardial Fat Area in 28 161 UK Biobank Participants. Journal of the American Heart Association , 12 , Article e030661. 10.1161/jaha.123.030661. Green open access
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Salih, DA; Bayram, S; Guelfi, S; Reynolds, RH; Shoai, M; Ryten, M; Brenton, J; ... Hardy, J; + view all (2019) Genetic variability in response to amyloid beta deposition influences Alzheimer's disease risk. Brain Communications 10.1093/braincomms/fcz022. (In press). Green open access
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Salpietro, V; Efthymiou, S; Manole, A; Maurya, B; Wiethoff, S; Ashokkumar, B; Cutrupi, MC; ... Houlden, H; + view all (2017) A loss-of-function homozygous mutation in DDX59 implicates a conserved DEAD-box RNA helicase in nervous system development and function. Hum Mutat 10.1002/humu.23368. (In press). Green open access
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Salpietro, V; Zollo, M; Vandrovcova, J; Ryten, M; Botia, JA; Ferrucci, V; Manole, A; ... Houlden, H; + view all (2017) The phenotypic and molecular spectrum of PEHO syndrome and PEHO-like disorders. Brain , 140 (8) e49. 10.1093/brain/awx155. Green open access
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Sánchez, JA; Gil-Martinez, AL; Cisterna, A; García-Ruíz, S; Gómez-Pascual, A; Reynolds, RH; Nalls, M; ... Botía, JA; + view all (2021) Modeling multifunctionality of genes with secondary gene co-expression networks in human brain provides novel disease insights. Bioinformatics 10.1093/bioinformatics/btab175. (In press). Green open access
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Schreglmann, Sebastian R; Goncalves, Tomas; Grant-Peters, Melissa; Kia, Demis A; Soreq, Lilach; Ryten, Mina; Wood, Nicholas W; ... Tomita, Kazunori; + view all (2023) Age-related telomere attrition in the human putamen. Aging Cell , Article e13861. 10.1111/acel.13861. (In press). Green open access
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Sethi, Siddharth; Zhang, David; Guelfi, Sebastian; Chen, Zhongbo; Garcia-Ruiz, Sonia; Olagbaju, Emmanuel O; Ryten, Mina; ... Botia, Juan A; + view all (2022) Leveraging omic features with F3UTER enables identification of unannotated 3'UTRs for synaptic genes. Nature Communications , 13 , Article 2270. 10.1038/s41467-022-30017-z. Green open access
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Silvennoinen, K; Puvirajasinghe, C; Hudgell, K; Sidhu, MK; Martins Custodio, H; Genomics England Research Consortium, .; Jones, WD; ... Sisodiya, SM; + view all (2021) Late diagnoses of Dravet syndrome: How many individuals are we missing? Epilepsia Open 10.1002/epi4.12525. (In press). Green open access
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Simone, R; Javad, F; Emmett, W; Wilkins, OG; Almeida, FL; Barahona-Torres, N; Zareba-Paslawska, J; ... De Silva, R; + view all (2021) MIR-NATs repress MAPT translation and aid proteostasis in neurodegeneration. Nature , 594 pp. 117-123. 10.1038/s41586-021-03556-6. Green open access
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Sisodiya, SM; Whelan, CD; Hatton, SN; Huynh, K; Altmann, A; Ryten, M; Vezzani, A; ... McDonald, CR; + view all (2020) The ENIGMA-Epilepsy working group: Mapping disease from large data sets. Human Brain Mapping 10.1002/hbm.25037. (In press). Green open access
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Soreq, L; UK Brain Expression Consortium, .; North American Brain Expression Consortium, .; Rose, J; Soreq, E; Hardy, J; Trabzuni, D; ... Ule, J; + view all (2017) Major Shifts in Glial Regional Identity Are a Transcriptional Hallmark of Human Brain Aging. Cell Reports , 18 (2) pp. 557-570. 10.1016/j.celrep.2016.12.011. Green open access
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Storm, CS; Kia, DA; Almramhi, MM; Bandres-Ciga, S; Finan, C; Hingorani, AD; Wood, NW; (2021) Finding genetically-supported drug targets for Parkinson's disease using Mendelian randomization of the druggable genome. Nature Communications , 12 (1) , Article 7342. 10.1038/s41467-021-26280-1. Green open access
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Thomas, AC; Williams, H; Seto-Salvia, N; Bacchelli, C; Jenkins, D; O'Sullivan, M; Mengrelis, K; ... Stanier, PM; + view all (2014) Mutations in SNX14 cause a distinctive autosomal recessive cerebellar ataxia and intellectual disability syndrome. The American Journal of Human Genetics , 95 (5) pp. 611-621. 10.1016/j.ajhg.2014.10.007. Green open access
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Thomas, G; Zarkali, A; Ryten, M; Shmueli, K; Gil Martinez, A; Leyland, L; McColgan, P; ... Weil, R; + view all (2021) Regional brain iron and gene expression provide insights into neurodegeneration in Parkinson’s disease. Brain , Article awab084. 10.1093/brain/awab084. (In press). Green open access
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Trabzuni, D; Ramasamy, A; Imran, S; Walker, R; Smith, C; Weale, ME; Hardy, J; ... North American Brain Expression Consortium; + view all (2013) Widespread sex differences in gene expression and splicing in the adult human brain. Nat Commun , 4 , Article 2771. 10.1038/ncomms3771. Green open access
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Trabzuni, D; Ryten, M; Emmett, W; Ramasamy, A; Lackner, KJ; Zeller, T; Walker, R; ... Plagnol, V; + view all (2013) Fine-mapping, gene expression and splicing analysis of the disease associated LRRK2 Locus. PLOS ONE , 8 (8) , Article e70724. 10.1371/journal.pone.0070724. Green open access
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Trabzuni, D; Wray, S; Vandrovcova, J; Ramasamy, A; Walker, R; Smith, C; Luk, C; ... Ryten, M; + view all (2012) MAPT expression and splicing is differentially regulated by brain region: relation to genotype and implication for tauopathies. Human Molecular Genetics , 21 (18) 4094 -4103. 10.1093/hmg/dds238. Green open access
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Tucci, A; Liu, YT; Preza, E; Pitceathly, RD; Chalasani, A; Plagnol, V; Land, JM; ... Houlden, H; + view all (2013) Novel C12orf65 mutations in patients with axonal neuropathy and optic atrophy. Journal of Neurology, Neurosurgery & Psychiatry 10.1136/jnnp-2013-306387. Green open access
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Vig, A; Poulter, JA; Ottaviani, D; Tavares, E; Toropova, K; Tracewska, AM; Mollica, A; ... Heon, E; + view all (2020) DYNC2H1 hypomorphic or retina-predominant variants cause nonsyndromic retinal degeneration. Genetics in Medicine 10.1038/s41436-020-0915-1. (In press). Green open access
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Walton, E; Hibar, D; Yilmaz, Z; Jahanshad, N; Cheung, J; Batury, V-L; Seitz, J; ... Bulik, CM; + view all (2019) Exploration of Shared Genetic Architecture Between Subcortical Brain Volumes and Anorexia Nervosa. Molecular Neurobiology , 56 (7) pp. 5146-5156. 10.1007/s12035-018-1439-4. Green open access
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Wei, Wei; Pagnamenta, Alistair T; Gleadall, Nicholas; Sanchis-Juan, Alba; Stephens, Jonathan; Broxholme, John; Tuna, Salih; ... Chinnery, Patrick F; + view all (2020) Author Correction: Nuclear-mitochondrial DNA segments resemble paternally inherited mitochondrial DNA in humans. Nature Communications , 11 , Article 3741. 10.1038/s41467-020-17572-z. Green open access
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Wei, W; Pagnamenta, AT; Gleadall, N; Sanchis-Juan, A; Stephens, J; Broxholme, J; Tuna, S; ... Chinnery, PF; + view all (2020) Nuclear-mitochondrial DNA segments resemble paternally inherited mitochondrial DNA in humans. Nature Communications , 11 , Article 1740. 10.1038/s41467-020-15336-3. Green open access
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Whelan, CD; Altmann, A; Botía, JA; Jahanshad, N; Hibar, DP; Absil, J; Alhusaini, S; ... Sisodiya, SM; + view all (2018) Structural brain abnormalities in the common epilepsies assessed in a worldwide ENIGMA study. Brain , 141 (2) pp. 391-408. 10.1093/brain/awx341. Green open access
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Wheway, G; Mitchison, H; (2019) Opportunities and Challenges for Molecular Understanding of Ciliopathies–The 100,000 Genomes Project. Frontiers in Genetics , 10 , Article 127. 10.3389/fgene.2019.00127. Green open access
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Witoelar, A; Jansen, IE; Wang, Y; Desikan, RS; Gibbs, JR; Blauwendraat, C; Thompson, WK; ... International Parkinson’s Disease Genomics Consortium (IPDGC), N, .; + view all (2017) Genome-wide Pleiotropy Between Parkinson Disease and Autoimmune Diseases. JAMA Neurology , 74 (7) pp. 780-792. 10.1001/jamaneurol.2017.0469. Green open access
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Zarkali, A; McColgan, P; Ryten, M; Reynolds, R; Leyland, L; Lees, A; Rees, G; (2020) Differences in network controllability and regional gene expression underlie visual hallucinations in Parkinson’s disease. Brain: a journal of neurology , 143 (11) pp. 3435-3448. 10.1093/brain/awaa270. Green open access
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Zarkali, A; McColgan, P; Ryten, M; Reynolds, R; Leyland, L; Lees, A; Rees, G; (2020) Dementia risk in Parkinson’s disease is associated with interhemispheric connectivity loss and determined by regional gene expression. NeuroImage: Clinical , 28 , Article 102470. 10.1016/j.nicl.2020.102470. Green open access
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Zhang, Hao-Yu; Minnis, Christopher; Gustavsson, Emil; Ryten, Mina; Mole, Sara E; (2024) CLN3 transcript complexity revealed by long-read RNA sequencing analysis. BMC Medical Genomics , 17 , Article 244. 10.1186/s12920-024-02017-z. Green open access
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Zhang, D; Guelfi, S; Garcia-Ruiz, S; Costa, B; Reynolds, RH; D’Sa, K; Liu, W; ... Ryten, M; + view all (2020) Incomplete annotation has a disproportionate impact on our understanding of Mendelian and complex neurogenetic disorders. Science Advances , 6 (24) , Article eaay8299. 10.1126/sciadv.aay8299. Green open access
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Zou, X; Koh, GCC; Nanda, AS; Degasperi, A; Urgo, K; Roumeliotis, TI; Agu, CA; ... Nik-Zainal, S; + view all (2021) A systematic CRISPR screen defines mutational mechanisms underpinning signatures caused by replication errors and endogenous DNA damage. Nature Cancer , 2 (6) pp. 643-657. 10.1038/s43018-021-00200-0. Green open access
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Working / discussion paper

Salih, D; Bayram, S; Guelfi, MS; Reynolds, RH; Shoai, M; Ryten, M; Brenton, J; ... Escott-Price, V; + view all (2018) Genetic variability in response to Aβ deposition influences Alzheimer's risk. BioRxiv: Cold Spring Harbor, NY, USA. Green open access
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Thesis

Guelfi, Manuel Sebastian; (2019) Regulation of gene expression in human brain using transcriptome sequencing. Doctoral thesis (Ph.D), UCL (University College London). Green open access
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Ponnampalam, SN; (2016) A blood-based gene expression and signalling pathway analysis to differentiate between high and low grade gliomas. Doctoral thesis , UCL (University College London). Green open access
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This list was generated on Sun Sep 14 01:59:49 2025 BST.