Browse by UCL people
Group by: Type | Date
Number of items: 87.
Article
Ahmed, N;
Flavell, S;
Ferns, B;
Frampton, D;
Edwards, SG;
Miller, RF;
Grant, P;
... Gupta, RK; + view all
(2019)
Development of the R263K Mutation to Dolutegravir in an HIV-1 Subtype D Virus Harboring 3 Class-Drug Resistance.
Open Forum Infectious Diseases
, 6
(1)
, Article ofy329. 10.1093/ofid/ofy329.
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Aitken, J;
Ambrose, K;
Barrell, S;
Beale, R;
Bineva-Todd, G;
Biswas, D;
Byrne, R;
... Wu, M; + view all
(2020)
Scalable and robust SARS-CoV-2 testing in an academic center.
Nature Biotechnology
, 38
(8)
pp. 927-931.
10.1038/s41587-020-0588-y.
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Anzinger, Joshua J;
Mears, Chadwic D;
Ades, AE;
Francis, Keisha;
Phillips, Yakima;
Leys, Ynolde E;
Spyer, Moira J;
... ZIKAction Consortium1,2, .; + view all
(2022)
Antenatal Seroprevalence of Zika and Chikungunya Viruses, Kingston Metropolitan Area, Jamaica, 2017-2019.
Emerging Infectious Diseases
, 28
(2)
pp. 473-475.
10.3201/eid2802.211849.
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Arenas-Pinto, A;
Stöhr, W;
Khoo, S;
Clarke, A;
Beeching, N;
Warwick, Z;
Lee, V;
... Protease Inhibitor monotherapy Versus Ongoing Triple therapy (PI; + view all
(2020)
Genital secretion HIV RNA shedding in HIV-positive patients on ritonavir-boosted protease inhibitor monotherapy or standard combination ART: a cross-sectional sub-study from the PIVOT Trial.
Antiviral Therapy
10.3851/IMP3340.
(In press).
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Arulkumaran, N;
Snow, TAC;
Kulkarni, A;
Brealey, D;
Rickman, HM;
Rees-Spear, C;
Spyer, MJ;
... Singer, M; + view all
(2021)
Influence of IL-6 levels on patient survival in COVID-19.
Journal of Critical Care
, 66
pp. 123-125.
10.1016/j.jcrc.2021.08.013.
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Arulkumaran, N;
Snow, TAC;
Kulkarni, A;
Brealey, D;
Rickman, HM;
Rees-Spear, C;
Spyer, MJ;
... Singer, M; + view all
(2021)
Sex differences in immunological responses to COVID-19: a cross-sectional analysis of a single-centre cohort.
British Journal of Anaesthesia
10.1016/j.bja.2021.05.013.
(In press).
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Balestrini, S;
Koepp, MJ;
Gandhi, S;
Rickman, HM;
Yen Shin, G;
Houlihan, CF;
Anders-Cannon, J;
... Sisodiya, SM; + view all
(2021)
Clinical outcomes of COVID-19 in long-term care facilities for people with epilepsy.
Epilepsy & Behavior
, 115
, Article 107602. 10.1016/j.yebeh.2020.107602.
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Bamford, A;
Turkova, A;
Lyall, H;
Foster, C;
Klein, N;
Bastiaans, D;
Burger, D;
... Welch, S; + view all
(2018)
Paediatric European Network for Treatment of AIDS (PENTA) guidelines for treatment of paediatric HIV-1 infection 2015: Optimizing health in preparation for adult life.
HIV Medicine
, 19
(1)
e1-e42.
10.1111/hiv.12217.
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Benjamin, LA;
Paterson, RW;
Moll, R;
Pericleous, C;
Brown, R;
Mehta, PR;
Athauda, D;
... Efthymiou, M; + view all
(2021)
Antiphospholipid antibodies and neurological manifestations in acute COVID-19: A single-centre cross-sectional study.
EClinicalMedicine
, Article 101070. 10.1016/j.eclinm.2021.101070.
(In press).
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Blackburn, R;
Frampton, D;
Smith, C;
Fragaszy, E;
Watson, S;
Ferns, R;
Binter, S;
... Hayward, A; + view all
(2019)
Nosocomial transmission of influenza: a retrospective cross-sectional study using next generation sequencing at a hospital in England (2012-2014).
Influenza and Other Respiratory Viruses
, 13
(6)
pp. 556-563.
10.1111/irv.12679.
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Boshier, FAT;
Venturini, C;
Stirrup, O;
Guerra-Assunção, JA;
Alcolea-Medina, A;
Becket, AH;
Byott, M;
... COG-UK HOCI Variant Substudy consortium*, The COVID-19 Genomics; + view all
(2021)
The Alpha variant was not associated with excess nosocomial SARS-CoV-2 infection in a multi-centre UK hospital study.
Journal of Infection
, 83
(6)
pp. 693-700.
10.1016/j.jinf.2021.09.022.
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Buck, M;
Poirier, E;
Cardoso, A;
Frederico, B;
Canton, J;
Barrell, S;
Beale, R;
... The Crick COVID-19 Consortium; + view all
(2021)
SARS-CoV-2 detection by a clinical diagnostic RT-LAMP assay [version 1; peer review: 1 approved with reservations].
Wellcome Open Research
, 6
(9)
10.12688/wellcomeopenres.16517.1.
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Buck, MD;
Poirier, EZ;
Cardoso, A;
Frederico, B;
Canton, J;
Barrell, S;
Beale, R;
... Crick COVID-19 Consortium; + view all
(2021)
SARS-CoV-2 detection by a clinical diagnostic RT-LAMP assay.
Wellcome Open Research
, 6
, Article 9. 10.12688/wellcomeopenres.16517.2.
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Busby, E;
Whale, AS;
Ferns, RB;
Grant, PR;
Morley, G;
Campbell, J;
Foy, CA;
... Garson, JA; + view all
(2017)
Instability of 8E5 calibration standard revealed by digital PCR risks inaccurate quantification of HIV DNA in clinical samples by qPCR.
Scientific Reports
, 7
, Article 1209. 10.1038/s41598-017-01221-5.
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Butler, K;
Inshaw, J;
Ford, D;
Bernays, S;
Scott, K;
Kenny, J;
Klein, N;
... Gibb, D; + view all
(2016)
BREATHER (PENTA 16) short-cycle therapy (SCT) (5 days on/2 days off) in young people with chronic human immunodeficiency virus infection: an open, randomised, parallel-group Phase II/III trial.
Health Technology Assessment
, 20
(49)
10.3310/hta20490.
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Butler, K;
Turkova, A;
Inshaw, J;
Compagnucci, A;
Kenny, J;
Saidi, Y;
Musiime, V;
... Gibb, DM; + view all
(2016)
Weekends-off efavirenz-based antiretroviral therapy in HIV-infected children, adolescents, and young adults (BREATHER): a randomised, open-label, non-inferiority, phase 2/3 trial.
LANCET HIV
, 3
(9)
E421-E430.
10.1016/S2352-3018(16)30054-6.
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Byrne, T;
Patel, P;
Shrotri, M;
Beale, S;
Michie, S;
Butt, J;
Hawkins, N;
... Gilson, R; + view all
(2021)
Trends, patterns and psychological influences on COVID-19 vaccination intention: Findings from a large prospective community cohort study in England and Wales (Virus Watch).
Vaccine
10.1016/j.vaccine.2021.09.066.
(In press).
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Campbell, Cori;
Wang, Tingyan;
Stockdale, Alexander J;
Todd, Stacy;
Jaworski, Jakub;
Glampson, Ben;
Papadimitriou, Dimitri;
... Matthews, Philippa C; + view all
(2025)
Hepatitis B Virus (HBV) Treatment Eligibility in the UK: Retrospective Longitudinal Cohort Data to Explore the Impact of Changes in Clinical Guidelines.
Journal of Viral Hepatitis
, 32
(11)
, Article e70098. 10.1111/jvh.70098.
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Dalzini, A;
Ballin, G;
Dominguez-Rodriguez, S;
Rojo, P;
Petrara, MR;
Foster, C;
Cotugno, N;
... EPIICAL Consortium, .; + view all
(2021)
Size of HIV-1 reservoir is associated with telomere shortening and immunosenescence in early-treated European children with perinatally acquired HIV-1.
Journal of the International AIDS Society
, 24
(11)
, Article e25847. 10.1002/jia2.25847.
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Deakin, CT;
Cornish, GH;
Ng, KW;
Faulkner, N;
Bolland, W;
Hope, J;
Rosa, A;
... Kassiotis, G; + view all
(2021)
Favourable antibody responses to human coronaviruses in children and adolescents with autoimmune rheumatic diseases.
Med
, 2
(9)
1093-1106.e6.
10.1016/j.medj.2021.08.001.
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Dhiman, A;
Yom-Tov, E;
Pellis, L;
Edelstein, M;
Pebody, R;
Hayward, A;
House, T;
... Rodger, A; + view all
(2024)
Estimating the household secondary attack rate and serial interval of COVID-19 using social media.
npj Digital Medicine
, 7
(1)
, Article 194. 10.1038/s41746-024-01160-2.
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Eales, O;
Page, AJ;
De Oliveira Martins, L;
Wang, H;
Bodinier, B;
Haw, D;
Jonnerby, J;
... Elliott, P; + view all
(2022)
SARS-CoV-2 lineage dynamics in England from September to November 2021: high diversity of Delta sub-lineages and increased transmissibility of AY.4.2.
BMC Infectious Diseases
, 22
, Article 647. 10.1186/s12879-022-07628-4.
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El Bouzidi, K;
Collier, D;
Nastouli, E;
Copas, AJ;
Miller, RF;
Gupta, RK;
(2016)
Virological efficacy of PI monotherapy for HIV-1 in clinical practice.
Journal of Antimicrobial Chemotherapy
, 71
(11)
pp. 3228-3234.
10.1093/jac/dkw265.
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El Bouzidi, K;
White, E;
Mbisa, JL;
Sabin, CA;
Phillips, AN;
Mackie, N;
Pozniak, AL;
... UK HIV Drug Resistance Database (UKHDRD) and the UK Collaborativ; + view all
(2016)
HIV-1 drug resistance mutations emerging on darunavir therapy in PI-naive and -experienced patients in the UK.
Journal of Antimicrobial Chemotherapy
, 71
(12)
pp. 3487-3494.
10.1093/jac/dkw343.
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Faulkner, N;
Ng, KW;
Wu, MY;
Harvey, R;
Margaritis, M;
Paraskevopoulou, S;
Houlihan, C;
... Kassiotis, G; + view all
(2021)
Reduced antibody cross-reactivity following infection with B.1.1.7 than with parental SARS-CoV-2 strains.
eLife
, 10
, Article e69317. 10.7554/eLife.69317.
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Fearnhill, E;
Gourlay, A;
Malyuta, R;
Simmons, R;
Ferns, RB;
Grant, P;
Nastouli, E;
... CASCADE Collaboration in EuroCoord; + view all
(2017)
A Phylogenetic Analysis of HIV-1 Sequences in Kiev: Findings among Key Populations.
Clinical Infectious Diseases
, 65
(7)
pp. 1127-1135.
10.1093/cid/cix499.
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Foster, C;
Bamford, A;
Turkova, A;
Welch, S;
Klein, N;
PENTA Guidelines Writing Group and PENTA steering committee, .;
(2016)
Paediatric European Network for Treatment of AIDS Treatment Guideline 2016 update: antiretroviral therapy recommended for all children living with HIV.
HIV Medicine
, 18
(2)
pp. 133-134.
10.1111/hiv.12399.
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Foster, C;
Domínguez-Rodríguez, S;
Tagarro, A;
Gkouleli, T;
Heaney, J;
Watters, S;
Bamford, A;
... Early Treated Perinatally HIV Infected Individuals: Improving Ch; + view all
(2020)
The CARMA Study: Early Infant Antiretroviral Therapy-Timing Impacts on Total HIV-1 DNA Quantitation 12 Years Later.
Journal of the Pediatric Infectious Diseases Society
, Article piaa071. 10.1093/jpids/piaa071.
(In press).
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Frampton, D;
Rampling, T;
Cross, A;
Bailey, H;
Heaney, J;
Byott, M;
Scott, R;
... Nastouli, E; + view all
(2021)
Genomic characteristics and clinical effect of the emergent SARS-CoV-2 B.1.1.7 lineage in London, UK: a whole-genome sequencing and hospital-based cohort study.
Lancet Infectious Diseases
10.1016/S1473-3099(21)00170-5.
(In press).
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Gärtner, K;
Domínguez-Rodríguez, S;
Heaney, J;
Gkouleli, T;
Grant, P;
Dorgham, K;
Sauce, D;
... EPIICAL consortium; + view all
(2024)
Low unspliced cell-associated HIV RNA in early treated adolescents living with HIV on long suppressive ART.
Frontiers in Immunology
, 15
, Article 1334236. 10.3389/fimmu.2024.1334236.
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Gaskell, KM;
Houlihan, C;
Nastouli, E;
Checkley, AM;
(2017)
Persistent Zika Virus Detection in Semen in a Traveler Returning to the United Kingdom from Brazil, 2016.
Emerging Infectious Disease
, 23
(1)
pp. 137-139.
10.3201/eid2301.161300.
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Gliddon, HD;
Frampton, D;
Munsamy, V;
Heaney, J;
Pataillot-Meakin, T;
Nastouli, E;
Pym, AS;
... McKendry, RA; + view all
(2021)
A Rapid Drug Resistance Genotyping Workflow for Mycobacterium tuberculosis, Using Targeted Isothermal Amplification and Nanopore Sequencing.
Microbiology Spectrum
, 9
(3)
, Article e0061021. 10.1128/Spectrum.00610-21.
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Gray, ER;
Heaney, J;
Ferns, RB;
Sequeira, PC;
Nastouli, E;
Garson, JA;
(2019)
Minor groove binder modification of widely used TaqMan hydrolysis probe for detection of dengue virus reduces risk of false-negative real-time PCR results for serotype 4.
Journal of Virological Methods
, 268
pp. 17-23.
10.1016/j.jviromet.2019.03.006.
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Gray, ER;
Turbé, V;
Lawson, VE;
Page, RH;
Cook, ZC;
Ferns, RB;
Nastouli, E;
... McKendry, RA; + view all
(2018)
Ultra-rapid, sensitive and specific digital diagnosis of HIV with a dual-channel SAW biosensor in a pilot clinical study.
npj Digital Medicine
, 1
, Article 35. 10.1038/s41746-018-0041-5.
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Gupta, RK;
Abdul-Jawad, S;
McCoy, LE;
Mok, HP;
Peppa, D;
Salgado, M;
Martinez-Picado, J;
... Olavarria, E; + view all
(2019)
HIV-1 remission following CCR5Δ32/Δ32 haematopoietic stem-cell transplantation.
Nature
, 568
pp. 244-249.
10.1038/s41586-019-1027-4.
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Gupta, RK;
Peppa, D;
Hill, AL;
Gálvez, C;
Salgado, M;
Pace, M;
McCoy, LE;
... Olavarria, E; + view all
(2020)
Evidence for HIV-1 cure after CCR5Δ32/Δ32 allogeneic haemopoietic stem-cell transplantation 30 months post analytical treatment interruption: a case report.
The Lancet HIV
, 7
(5)
e340-e347.
10.1016/S2352-3018(20)30069-2.
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Gupta-Wright, A;
Fielding, K;
van Oosterhout, JJ;
Alufandika, M;
Grint, DJ;
Chimbayo, E;
Heaney, J;
... Gupta, RK; + view all
(2020)
Virological failure, HIV-1 drug resistance, and early mortality in adults admitted to hospital in Malawi: an observational cohort study.
Lancet HIV
, 7
(9)
e620-e628.
10.1016/S2352-3018(20)30172-7.
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Harvala, H;
Frampton, D;
Grant, P;
Raffle, J;
Ferns, RB;
Kozlakidis, Z;
Kellam, P;
... ICONIC Consortium; + view all
(2017)
Emergence of a novel subclade of influenza A(H3N2) virus in London, December 2016 to January 2017.
Eurosurveillance
, 22
(8)
10.2807/1560-7917.ES.2017.22.8.30466.
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Hayward, A;
Fragaszy, E;
Kovar, J;
Nguyen, V;
Beale, S;
Byrne, T;
Aryee, A;
... Aldridge, RW; + view all
(2021)
Risk factors, symptom reporting, healthcare-seeking behaviour and adherence to public health guidance: protocol for Virus Watch, a prospective community cohort study.
BMJ Open
, 11
(6)
, Article e048042. 10.1136/bmjopen-2020-048042.
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Hellewell, J;
Russell, TW;
SAFER Investigators and Field Study Team, ,;
Crick COVID-19 Consortium, ,;
CMMID COVID-19 working group, ,;
Beale, R;
Kelly, G;
... Kucharski, AJ; + view all
(2021)
Estimating the effectiveness of routine asymptomatic PCR testing at different frequencies for the detection of SARS-CoV-2 infections.
BMC Medicine
, 19
(1)
, Article 106. 10.1186/s12916-021-01982-x.
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Houlihan, C;
Frampton, D;
Ferns, RB;
Raffle, J;
Grant, P;
Reidy, M;
Hail, L;
... Nastouli, E; + view all
(2018)
The use of whole genome sequencing in the investigation of a nosocomial influenza virus outbreak.
The Journal of Infectious Diseases
, 218
(9)
pp. 1485-1489.
10.1093/infdis/jiy335.
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Houlihan, CF;
Vora, N;
Byrne, T;
Lewer, D;
Kelly, G;
Heaney, J;
Gandhi, S;
... SAFER Investigators; + view all
(2020)
Pandemic peak SARS-CoV-2 infection and seroconversion rates in London frontline health-care workers.
The Lancet
, 396
(10246)
e6-e7.
10.1016/S0140-6736(20)31484-7.
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Inshaw, J;
Leen, C;
Fisher, M;
Gilson, R;
Hawkins, D;
Collins, S;
Fox, J;
... UK HIV, Seroconverters Cohort; + view all
(2015)
The Impact of HCV Infection Duration on HIV Disease Progression and Response to cART amongst HIV Seroconverters in the UK.
PLoS One
, 10
(7)
, Article e0132772. 10.1371/journal.pone.0132772.
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Jones, GM;
Busby, E;
Garson, JA;
Grant, PR;
Nastouli, E;
Devonshire, AS;
Whale, AS;
(2016)
Digital PCR dynamic range is approaching that of real-time quantitative PCR.
Biomolecular Detection and Quantification
, 10
pp. 31-33.
10.1016/j.bdq.2016.10.001.
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Jose, S;
Quinn, K;
Dunn, D;
Cox, A;
Sabin, C;
Fidler, S;
UK CHIC, and UK HDRD Steering Committees;
(2016)
Virological failure and development of new resistance mutations according to CD4 count at combination antiretroviral therapy initiation.
HIV Medicine
, 17
(5)
pp. 368-372.
10.1111/hiv.12302.
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Keddie, S;
Ziff, O;
Chou, MKL;
Taylor, RL;
Heslegrave, A;
Garr, E;
Lakdawala, N;
... Lunn, MP; + view all
(2020)
Laboratory biomarkers associated with COVID-19 severity and management.
Clinical Immunology
, 221
, Article 108614. 10.1016/j.clim.2020.108614.
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Lampejo, T;
Bruce, M;
Teall, A;
Dall'Antonia, M;
Crawley-Boevey, E;
Grant, P;
Polhill, S;
... Nastouli, E; + view all
(2017)
Caring for a patient with rabies: implications of the Milwaukee protocol for infection control and public health measures.
Journal of Hospital Infection
, 96
(4)
pp. 385-391.
10.1016/j.jhin.2017.04.018.
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Mbisa, JL;
Kirwan, P;
Tostevin, A;
Ledesma, J;
Bibby, DF;
Brown, A;
Myers, R;
... UK HIV Drug Resistance Database; + view all
(2019)
Determining the Origins of Human Immunodeficiency Virus Type 1 Drug-resistant Minority Variants in People Who Are Recently Infected Using Phylogenetic Reconstruction.
Clinical Infectious Diseases
, 69
(7)
pp. 1136-1143.
10.1093/cid/ciy1048.
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Miller, BS;
Bezinge, L;
Gliddon, HD;
Huang, D;
Dold, G;
Gray, ER;
Heaney, J;
... McKendry, RA; + view all
(2020)
Spin-enhanced nanodiamond biosensing for ultrasensitive diagnostics.
Nature
, 587
(7835)
pp. 588-593.
10.1038/s41586-020-2917-1.
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Ng, KW;
Faulkner, N;
Cornish, GH;
Rosa, A;
Harvey, R;
Hussain, S;
Ulferts, R;
... Kassiotis, G; + view all
(2020)
Preexisting and de novo humoral immunity to SARS-CoV-2 in humans.
Science
, Article eabe1107. 10.1126/science.abe1107.
(In press).
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Nickbakhsh, S;
Hughes, J;
Christofidis, N;
Griffiths, E;
Shaaban, S;
Enright, J;
Smollett, K;
... Simpson, DA; + view all
(2022)
Genomic epidemiology of SARS-CoV-2 in a university outbreak setting and implications for public health planning.
Scientific Reports
, 12
, Article 11735. 10.1038/s41598-022-15661-1.
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Olcott, Flora;
Oddie, Philip D;
Barlow, Maeve J;
Mamarelis, Athanasios;
Byott, Matthew;
Grant, Paul;
Botha, Johannes;
... Ghosh, Indrajit; + view all
(2025)
Hepatitis B reactivation following switch away from tenofovir-containing anti-retroviral therapy in people living with HIV: A case series and lessons for practice.
Clinical Infectious Diseases
, Article ciaf634. 10.1093/cid/ciaf634.
(In press).
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Pascall, DJ;
Vink, E;
Blacow, R;
Bulteel, N;
Campbell, A;
Campbell, R;
Clifford, S;
... Carabelli, AM; + view all
(2023)
The SARS-CoV-2 Alpha variant was associated with increased clinical severity of COVID-19 in Scotland: A genomics-based retrospective cohort analysis.
PLoS ONE
, 18
(4)
, Article e0284187. 10.1371/journal.pone.0284187.
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Rees-Spear, C;
Muir, L;
Griffith, SA;
Heaney, J;
Aldon, Y;
Snitselaar, JL;
Thomas, P;
... McCoy, LE; + view all
(2021)
The effect of spike mutations on SARS-CoV-2 neutralization.
Cell Reports
, Article 108890. 10.1016/j.celrep.2021.108890.
(In press).
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Rickman, HM;
Rampling, T;
Shaw, K;
Martinez-Garcia, G;
Hail, L;
Coen, P;
Shahmanesh, M;
... Houlihan, CF; + view all
(2021)
Nosocomial Transmission of Coronavirus Disease 2019: A Retrospective Study of 66 Hospital-acquired Cases in a London Teaching Hospital.
Clinical Infectious Diseases
, 72
(4)
pp. 690-693.
10.1093/cid/ciaa816.
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Rinaldi, S;
de Armas, L;
Dominguez-Rodríguez, S;
Pallikkuth, S;
Dinh, V;
Pan, L;
Gӓrtner, K;
... EPIICAL consortium; + view all
(2021)
T cell immune discriminants of HIV reservoir size in a pediatric cohort of perinatally infected individuals.
PLoS Pathogens
, 17
(4)
, Article e1009533. 10.1371/journal.ppat.1009533.
(In press).
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Roberts, Sophie Louise;
Kendall, Giles S;
Edwards, Sarah;
Pandya, Pranav;
Peebles, Donald;
Nastouli, Eleni;
(2022)
Screening policies for cytomegalovirus in pregnancy in the era of antivirals.
The Lancet
, 400
(10351)
pp. 489-490.
10.1016/S0140-6736(22)01299-5.
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Rosa, A;
Pye, VE;
Graham, C;
Muir, L;
Seow, J;
Ng, KW;
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