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Single-Molecule Reconstruction of Oligonucleotide Secondary Structure by Atomic Force Microscopy.

Pyne, A; Thompson, R; Leung, C; Roy, D; Hoogenboom, BW; (2014) Single-Molecule Reconstruction of Oligonucleotide Secondary Structure by Atomic Force Microscopy. Small , 10 (16) pp. 3257-3261. 10.1002/smll.201400265. Green open access

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Abstract

Based on soft-touch atomic force microscopy, a method is described to reconstruct the secondary structure of single extended biomolecules, without the need for crystallization. The method is tested by accurately reproducing the dimensions of the B-DNA crystal structure. Importantly, intramolecular variations in groove depth of the DNA double helix are resolved, which would be inaccessible for methods that rely on ensemble-averaging.

Type: Article
Title: Single-Molecule Reconstruction of Oligonucleotide Secondary Structure by Atomic Force Microscopy.
Open access status: An open access version is available from UCL Discovery
DOI: 10.1002/smll.201400265
Publisher version: http://dx.doi.org/10.1002/smll.201400265
Additional information: © 2014 The Authors. Published by WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
Keywords: DNA, atomic force microscopy, biomolecules, biophysics, oligonucleotides
UCL classification: UCL
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences > Dept of Physics and Astronomy
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences > London Centre for Nanotechnology
URI: https://discovery.ucl.ac.uk/id/eprint/1427322
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