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The Impact of Biomechanical Quantities on PINNs-Based Medical Image Registration

Ma, S; Lin, Z; Du, X; Hu, Y; Min, Z; (2026) The Impact of Biomechanical Quantities on PINNs-Based Medical Image Registration. In: Ni, D and Noble, A and Huang, R and Xue, W, (eds.) Simplifying Medical Ultrasound. ASMUS 2025. (pp. pp. 98-108). Springer: Cham, Switzerland. Green open access

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Abstract

Biomechanical constraints are increasingly being adopted in medical image registration to enforce physically plausible soft-tissue deformations. When formulating loss functions for physics-informed neural networks (PINNs)-based registration, a central design choice is whether the network should explicitly predict biophysical model parameters or implicitly infer them by enforcing their governing equations. In this study, we introduce four physics-informed regularization strategies for biomechanics-informed non-rigid point set registration: (i) stress prediction, (ii) strain prediction, (iii) stress–strain prediction, and (iv) deformation prediction. We provide a promising direction to understand and potentially utilised prior biomechanical knowledge to modern data-driven approach for motion modelling and medical image registration. On the simulation dataset, the deformation prediction strategy achieved the strongest performance, reducing the root mean square error (RMSE) from 1.748 ± 0.912 mm (FPT, without PINN) to 0.219 ± 0.057 mm (-87.5%) and chamfer distance from 1.260 ± 0.913 mm to 0.194 ± 0.057 mm, without generating negative jacobian determinants. Other PINNs strategies also yielded competitive results, stress (RMSE 0.264 ± 0.098 mm), strain (0.305 ± 0.116 mm), and stress–strain (0.242 ± 0.147 mm), all of which consistently outperformed conventional baselines such as BCPD (RMSE 2.326 ± 5.811 mm) and GMM-FEM (1.528 ± 0.912 mm). On the clinical dataset, the deformation prediction strategy again obtained the lowest target registration error (TRE 4.924 ± 1.542 mm, -16.6% vs. FPT), while maintaining a chamfer distance of 2.125 ± 0.291 mm and only negligible foldings (0.278 ± 0.312% negative Jacobians). The other PINNs variants, stress (TRE 5.694±1.780 mm), strain (5.359±1.746 mm), and stress–strain (5.912±2.008 mm), showed similar improvements over non-PINNs approaches, but remained slightly inferior to deformation prediction. The deformation prediction strategy was statistically significant against all methods (paired p<0.05), except BCPD on the simulation dataset. The source codes have been released at https://github.com/Msx00/PINNs-for-Point-Set-Registration.git.

Type: Proceedings paper
Title: The Impact of Biomechanical Quantities on PINNs-Based Medical Image Registration
Event: 6th International Workshop, ASMUS 2025, Held in Conjunction with MICCAI 2025
ISBN-13: 9783032063281
Open access status: An open access version is available from UCL Discovery
DOI: 10.1007/978-3-032-06329-8_10
Publisher version: https://doi.org/10.1007/978-3-032-06329-8_10
Language: English
Additional information: This version is the author accepted manuscript. For information on re-use, please refer to the publisher’s terms and conditions.
Keywords: Ultrasound Image Registration, Linear Elastic Regularization, Physics-informed Neural Networks
UCL classification: UCL
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science > Dept of Med Phys and Biomedical Eng
URI: https://discovery.ucl.ac.uk/id/eprint/10218748
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