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PomBase: a Global Core Biodata Resource—growth, collaboration, and sustainability

Rutherford, Kim M; Lera-Ramírez, Manuel; Wood, Valerie; (2024) PomBase: a Global Core Biodata Resource—growth, collaboration, and sustainability. Genetics 10.1093/genetics/iyae007. (In press). Green open access

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Abstract

PomBase (https://www.pombase.org), the model organism database (MOD) for fission yeast, was recently awarded Global Core Biodata Resource (GCBR) status by the Global Biodata Coalition (GBC; https://globalbiodata.org/) after a rigorous selection process. In this MOD review, we present PomBase’s continuing growth and improvement over the last 2 years. We describe these improvements in the context of the qualitative GCBR indicators related to scientific quality, comprehensivity, accelerating science, user stories, and collaborations with other biodata resources. This review also showcases the depth of existing connections both within the biocuration ecosystem and between PomBase and its user community.

Type: Article
Title: PomBase: a Global Core Biodata Resource—growth, collaboration, and sustainability
Open access status: An open access version is available from UCL Discovery
DOI: 10.1093/genetics/iyae007
Publisher version: http://dx.doi.org/10.1093/genetics/iyae007
Language: English
Additional information: © The Author(s) 2024. Published by Oxford University Press on behalf of The Genetics Society of America. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
Keywords: model organism, model organism database, MOD, fission yeast, Schizosaccharomyces pombe, Global BioData Coalition, Global Core Biodata Resource, standardization, FAIR, database, knowledgebase, biocuration
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Div of Biosciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Div of Biosciences > Genetics, Evolution and Environment
URI: https://discovery.ucl.ac.uk/id/eprint/10188029
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