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Defining causal variants in rare epilepsies: An essential team effort between biomedical scientists, geneticists and epileptologists

McTague, Amy; Brunklaus, Andreas; Barcia, Giulia; Varadkar, Sophia; Zuberi, Sameer M; Chatron, Nicolas; Parrini, Elena; ... Lesca, Gaetan; + view all (2022) Defining causal variants in rare epilepsies: An essential team effort between biomedical scientists, geneticists and epileptologists. European Journal of Medical Genetics , 65 (7) , Article 104531. 10.1016/j.ejmg.2022.104531. Green open access

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Abstract

In the last few years, with the advent of next generation sequencing (NGS), our knowledge of genes associated with monogenic epilepsies has significantly improved. NGS is also a powerful diagnostic tool for patients with epilepsy, through gene panels, exomes and genomes. This has improved diagnostic yield, reducing the time between the first seizure and a definitive molecular diagnosis. However, these developments have also increased the complexity of data interpretation, due to the large number of variants identified in a given patient and due to the phenotypic variability associated with many of the epilepsy-related genes. In this paper, we present examples of variant classification in “real life” clinic situations. We emphasize the importance of accurate phenotyping of the epilepsies including recognising variable/milder phenotypes and expansion of previously described phenotypes. There are some important issues specific to rare epilepsies – mosaicism and reduced penetrance - which affect genetic counselling. These challenges may be overcome through multidisciplinary meetings including epileptologists, pediatric neurologists, and clinical and molecular geneticists, in which every specialist learns from the others in a process which leads to for rapid and accurate diagnosis. This is an important milestone to achieve as targeted therapiesbased on the functional effects of pathogenic variants become available.

Type: Article
Title: Defining causal variants in rare epilepsies: An essential team effort between biomedical scientists, geneticists and epileptologists
Open access status: An open access version is available from UCL Discovery
DOI: 10.1016/j.ejmg.2022.104531
Publisher version: https://doi.org/10.1016/j.ejmg.2022.104531
Language: English
Additional information: This version is the author accepted manuscript. For information on re-use, please refer to the publisher’s terms and conditions.
Keywords: Epilepsy, Gene, Phenotype, Genotype, Multidisciplinary meetings
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > UCL GOS Institute of Child Health > Developmental Neurosciences Dept
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > UCL GOS Institute of Child Health
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
URI: https://discovery.ucl.ac.uk/id/eprint/10149577
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