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Structural mapping of GABRB3 variants reveals genotype–phenotype correlations

Johannesen, KM; Iqbal, S; Guazzi, M; Mohammadi, NA; Pérez-Palma, E; Schaefer, E; De Saint Martin, A; ... Gardella, E; + view all (2022) Structural mapping of GABRB3 variants reveals genotype–phenotype correlations. Genetics in Medicine , 24 (3) pp. 681-693. 10.1016/j.gim.2021.11.004. Green open access

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Abstract

Purpose: Pathogenic variants in GABRB3 have been associated with a spectrum of phenotypes from severe developmental disorders and epileptic encephalopathies to milder epilepsy syndromes and mild intellectual disability (ID). In this study, we analyzed a large cohort of individuals with GABRB3 variants to deepen the phenotypic understanding and investigate genotype–phenotype correlations. / Methods: Through an international collaboration, we analyzed electro-clinical data of unpublished individuals with variants in GABRB3, and we reviewed previously published cases. All missense variants were mapped onto the 3-dimensional structure of the GABRB3 subunit, and clinical phenotypes associated with the different key structural domains were investigated. / Results: We characterized 71 individuals with GABRB3 variants, including 22 novel subjects, expressing a wide spectrum of phenotypes. Interestingly, phenotypes correlated with structural locations of the variants. Generalized epilepsy, with a median age at onset of 12 months, and mild-to-moderate ID were associated with variants in the extracellular domain. Focal epilepsy with earlier onset (median: age 4 months) and severe ID were associated with variants in both the pore-lining helical transmembrane domain and the extracellular domain. / Conclusion: These genotype–phenotype correlations will aid the genetic counseling and treatment of individuals affected by GABRB3-related disorders. Future studies may reveal whether functional differences underlie the phenotypic differences.

Type: Article
Title: Structural mapping of GABRB3 variants reveals genotype–phenotype correlations
Location: United States
Open access status: An open access version is available from UCL Discovery
DOI: 10.1016/j.gim.2021.11.004
Publisher version: https://doi.org/10.1016/j.gim.2021.11.004
Language: English
Additional information: This version is the author accepted manuscript. For information on re-use, please refer to the publisher's terms and conditions.
Keywords: Epilepsy, GABA, GABRB3, Genetics, Mapping
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > UCL GOS Institute of Child Health > Developmental Neurosciences Dept
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > UCL GOS Institute of Child Health
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
URI: https://discovery.ucl.ac.uk/id/eprint/10143074
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