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Epigenetic remodelling licences adult cholangiocytes for organoid formation and liver regeneration

Aloia, L; McKie, MA; Vernaz, G; Cordero-Espinoza, L; Aleksieva, N; van den Ameele, J; Antonica, F; ... Huch, M; + view all (2019) Epigenetic remodelling licences adult cholangiocytes for organoid formation and liver regeneration. Nature Cell Biology , 21 (11) pp. 1321-1333. 10.1038/s41556-019-0402-6. Green open access

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Abstract

Following severe or chronic liver injury, adult ductal cells (cholangiocytes) contribute to regeneration by restoring both hepatocytes and cholangiocytes. We recently showed that ductal cells clonally expand as self-renewing liver organoids that retain their differentiation capacity into both hepatocytes and ductal cells. However, the molecular mechanisms by which adult ductal-committed cells acquire cellular plasticity, initiate organoids and regenerate the damaged tissue remain largely unknown. Here, we describe that ductal cells undergo a transient, genome-wide, remodelling of their transcriptome and epigenome during organoid initiation and in vivo following tissue damage. TET1-mediated hydroxymethylation licences differentiated ductal cells to initiate organoids and activate the regenerative programme through the transcriptional regulation of stem-cell genes and regenerative pathways including the YAP–Hippo signalling. Our results argue in favour of the remodelling of genomic methylome/hydroxymethylome landscapes as a general mechanism by which differentiated cells exit a committed state in response to tissue damage.

Type: Article
Title: Epigenetic remodelling licences adult cholangiocytes for organoid formation and liver regeneration
Open access status: An open access version is available from UCL Discovery
DOI: 10.1038/s41556-019-0402-6
Publisher version: https://doi.org/10.1038/s41556-019-0402-6
Language: English
Additional information: This version is the author accepted manuscript. For information on re-use, please refer to the publisher’s terms and conditions.
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Lab for Molecular Cell Bio MRC-UCL
URI: https://discovery.ucl.ac.uk/id/eprint/10097378
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