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A compartment based model for non-invasive cell body imaging by diffusion MRI

Palombo, M; Shemesh, N; Ianus, A; Alexander, D; Zhang, H; (2018) A compartment based model for non-invasive cell body imaging by diffusion MRI. In: Miller, KL and Port, JD, (eds.) Proceedings of the Joint Annual Meeting ISMRM-ESMRMB 2018. ISMRM (International Society for Magnetic Resonance in Medicine): Concord, CA, USA. Green open access

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Abstract

This study aims to open a new window onto brain tissue microstructure by proposing a new technique to estimate cell body (namely soma) size/density non-invasively. Using Monte-Carlo simulation and data from rat brain, we show that soma’s size and density have a specific signature on the direction-averaged DW-MRI signal at high b values. Simulation shows that, at reasonably short diffusion times, soma and neurites can be approximated as two non-exchanging compartments, modelled as “sphere” and “sticks” respectively. Fitting this simple compartment model to rat data produces maps with contrast consistent with published histological data.

Type: Proceedings paper
Title: A compartment based model for non-invasive cell body imaging by diffusion MRI
Event: Joint Annual Meeting ISMRM-ESMRMB 2018, 16-21 June 2018, Paris, France
Open access status: An open access version is available from UCL Discovery
Publisher version: https://www.ismrm.org/18m/
Language: English
Additional information: This version is the author accepted manuscript. For information on re-use, please refer to the publisher’s terms and conditions.
UCL classification: UCL
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science > Dept of Computer Science
URI: https://discovery.ucl.ac.uk/id/eprint/10074388
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