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Leaf and wood classification framework for terrestrial LiDAR point clouds

Vicari, MB; Disney, M; Wilkes, P; Burt, A; Calders, K; Woodgate, W; (2019) Leaf and wood classification framework for terrestrial LiDAR point clouds. Methods in Ecology and Evolution 10.1111/2041-210X.13144. (In press). Green open access

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Abstract

Methods in Ecology and Evolution published by John Wiley & Sons Ltd on behalf of British Ecological Society. Leaf and wood separation is a key step to allow a new range of estimates from Terrestrial LiDAR data, such as quantifying above-ground biomass, leaf and wood area and their 3D spatial distributions. We present a new method to separate leaf and wood from single tree point clouds automatically. Our approach combines unsupervised classification of geometric features and shortest path analysis. The automated separation algorithm and its intermediate steps are presented and validated. Validation consisted of using a testing framework with synthetic point clouds, simulated using ray-tracing and 3D tree models and 10 field scanned tree point clouds. To evaluate results we calculated accuracy, kappa coefficient and F-score. Validation using simulated data resulted in an overall accuracy of 0.83, ranging from 0.71 to 0.94. Per tree average accuracy from synthetic data ranged from 0.77 to 0.89. Field data results presented and overall average accuracy of 0.89. Analysis of each step showed accuracy ranging from 0.75 to 0.98. F-scores from both simulated and field data were similar, with scores from leaf usually higher than for wood. Our separation method showed results similar to others in literature, albeit from a completely automated workflow. Analysis of each separation step suggests that the addition of path analysis improved the robustness of our algorithm. Accuracy can be improved with per tree parameter optimization. The library containing our separation script can be easily installed and applied to single tree point cloud. Average processing times are below 10 min for each tree.

Type: Article
Title: Leaf and wood classification framework for terrestrial LiDAR point clouds
Open access status: An open access version is available from UCL Discovery
DOI: 10.1111/2041-210X.13144
Publisher version: http://doi.org/10.1111/2041-210X.13144
Language: English
Additional information: Copyright © 2019 The Authors. Methods in Ecology and Evolution published by John Wiley & Sons Ltd on behalf of British Ecological Society. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
Keywords: 3D point clouds, field data, LiDAR, material separation, simulated data, terrestrial LiDAR, testing framework
UCL classification: UCL
UCL > Provost and Vice Provost Offices > UCL SLASH
UCL > Provost and Vice Provost Offices > UCL SLASH > Faculty of S&HS
UCL > Provost and Vice Provost Offices > UCL SLASH > Faculty of S&HS > Dept of Geography
URI: https://discovery.ucl.ac.uk/id/eprint/10068584
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