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Generating mutant renal cell lines using CRISPR technologies

Perretta Tejedor, N; Freke, G; Seda, M; Long, D; Jenkins, D; (2020) Generating mutant renal cell lines using CRISPR technologies. Methods in Molecular Biology , 2067 pp. 323-340. 10.1007/978-1-4939-9841-8_20. Green open access

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Abstract

Gene-editing using the CRISPR/Cas9 system is an extremely efficient approach for generating mutations within the genomic DNA of immortalised cell lines. This procedure begins with a straightforward cloning step to generate a single plasmid encoding the Cas9 enzyme as well as a synthetic guide RNA (sgRNA) which is selected to target specific sites within the genome. This plasmid is transfected into cells either alone, in order to generate random insertion-deletion alleles (‘indels’) at the desired locus via the non-homologous end-joining pathway, or in conjunction with a homology directed repair template oligonucleotide to generate a specific point mutation. Here we describe a procedure to perform gene-editing in IMCD3 and HEK293 cells and to subsequently isolate clonal cell lines carrying mutations of interest.

Type: Article
Title: Generating mutant renal cell lines using CRISPR technologies
Open access status: An open access version is available from UCL Discovery
DOI: 10.1007/978-1-4939-9841-8_20
Publisher version: https://doi.org/10.1007/978-1-4939-9841-8_20
Language: English
Additional information: © The Author(s) 2020. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Keywords: Gene editing, sgRNA, pX330, IMCD3, HEK293, transfection, fluorescence-activated cell sorting
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > UCL GOS Institute of Child Health
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > UCL GOS Institute of Child Health > Developmental Biology and Cancer Dept
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > UCL GOS Institute of Child Health > Genetics and Genomic Medicine Dept
URI: https://discovery.ucl.ac.uk/id/eprint/10062690
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