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Post-translational site-selective protein backbone alpha-deuteration

Galan, SRG; Wickens, JR; Dadova, J; Ng, W-L; Zhang, X; Simion, RA; Quinlan, R; ... Davis, BG; + view all (2018) Post-translational site-selective protein backbone alpha-deuteration. Nature Chemical Biology , 14 (10) pp. 955-963. 10.1038/s41589-018-0128-y. Green open access

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Abstract

Isotopic replacement has long-proven applications in small molecules. However, applications in proteins are largely limited to biosynthetic strategies or exchangeable (for example, N–H/D) labile sites only. The development of postbiosynthetic, C–1H → C–2H/D replacement in proteins could enable probing of mechanisms, among other uses. Here we describe a chemical method for selective protein α-carbon deuteration (proceeding from Cys to dehydroalanine (Dha) to deutero-Cys) allowing overall 1H→2H/D exchange at a nonexchangeable backbone site. It is used here to probe mechanisms of reactions used in protein bioconjugation. This analysis suggests, together with quantum mechanical calculations, stepwise deprotonations via on-protein carbanions and unexpected sulfonium ylides in the conversion of Cys to Dha, consistent with a ‘carba-Swern’ mechanism. The ready application on existing, intact protein constructs (without specialized culture or genetic methods) suggests this C–D labeling strategy as a possible tool in protein mechanism, structure, biotechnology and medicine.

Type: Article
Title: Post-translational site-selective protein backbone alpha-deuteration
Open access status: An open access version is available from UCL Discovery
DOI: 10.1038/s41589-018-0128-y
Publisher version: https://doi.org/10.1038/s41589-018-0128-y
Language: English
Additional information: This version is the author accepted manuscript. For information on re-use, please refer to the publisher’s terms and conditions.
Keywords: Science & Technology, Life Sciences & Biomedicine, Biochemistry & Molecular Biology, NUCLEAR-MAGNETIC-RESONANCE, ELIMINIERUNG BEI SULFONIUMSALZEN, DIHYDROFOLATE-REDUCTASE, CYSTEINE MODIFICATION, DIMETHYL-SULFOXIDE, ZUM MECHANISMUS, DEHYDROALANINE, DEUTERIUM, PEPTIDES, INSIGHTS
UCL classification: UCL
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences > Dept of Chemistry
URI: https://discovery.ucl.ac.uk/id/eprint/10060853
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