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Thalamic nuclei segmentation using tractography, population-specific priors and local fibre orientation

Semedo, C; Cardoso, MJ; Vos, SB; Sudre, CH; Bocchetta, M; Ribbens, A; Smeets, D; ... Ourselin, S; + view all (2018) Thalamic nuclei segmentation using tractography, population-specific priors and local fibre orientation. In: Frangi, A and Schnabel, J and Davatzikos, C and Alberola-López, C and Fichtinger, G, (eds.) Medical Image Computing and Computer Assisted Intervention – MICCAI 2018. Lecture Notes in Computer Science. (pp. pp. 383-391). Springer: Cham. Green open access

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Abstract

The thalamus is a deep grey matter structure that plays an important role in propagating nerve impulses between subcortical regions and the cerebral cortex. It is composed of distinct nuclei that have unique long-range connectivity. Accurate thalamic nuclei segmentation provides insights about structural connectivity and the neurodegeneration mechanisms occurring in distinct brain disorders, for instance Alzheimer’s disease and Frontotemporal dementia (FTD). In this work, we propose a novel thalamic nuclei segmentation approach that relies on tractography, thalamic nuclei priors and local fibre orientation. Validation was performed in a cohort of healthy controls and FTD patients against other thalamus connectivity-based parcellation methods. Results showed that the proposed strategy led to anatomical plausible thalamic nuclei segmentations and was able to detect connectivity differences between controls and FTD patients.

Type: Proceedings paper
Title: Thalamic nuclei segmentation using tractography, population-specific priors and local fibre orientation
Event: Medical Image Computing and Computer Assisted Intervention – MICCAI 2018
ISBN-13: 9783030009304
Open access status: An open access version is available from UCL Discovery
DOI: 10.1007/978-3-030-00931-1_44
Publisher version: https://doi.org/10.1007/978-3-030-00931-1_44
Language: English
Additional information: This version is the author accepted manuscript. For information on re-use, please refer to the publisher’s terms and conditions.
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Brain Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Brain Sciences > UCL Queen Square Institute of Neurology
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Brain Sciences > UCL Queen Square Institute of Neurology > Neurodegenerative Diseases
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > Institute of Cardiovascular Science
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > Institute of Cardiovascular Science > Population Science and Experimental Medicine
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > Institute of Cardiovascular Science > Population Science and Experimental Medicine > MRC Unit for Lifelong Hlth and Ageing
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science > Dept of Computer Science
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Engineering Science > Dept of Med Phys and Biomedical Eng
URI: https://discovery.ucl.ac.uk/id/eprint/10060480
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