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Critical care data processing tools

Shi, S; Pérez-Suárez, D; Harris, S; MacCallum, N; Brealey, D; Singer, M; Hetherington, J; (2017) Critical care data processing tools. The Journal of Open Source Software , 2 (20) , Article 513. 10.21105/joss.00513. Green open access

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Abstract

cleanEHR (Shi et al. 2017) is a data cleaning and wrangling platform which works with the Critical Care Health Informatics Collaborative (CCHIC) database. CCHIC collects and gathers high resolution longitudinal patient record from critical care units at Cambridge, Guys/Kings/St Thomas’, Imperial, Oxford, UCL Hospitals. The increased adoption of high resolution longitudinal EHRs has created novel opportunities for researchers, clinicians and data scientists to access large, enriched patient databases (Harrison, Brady, and Rowan 2004) (Johnson et al. 2016). The purpose of cleanEHR is to enable researchers to answer clinical questions that are important to patients. cleanEHR is a solution to address various data reliability and accessibility problems as well. It provides a platform that enables data manipulation, transformation, reduction, cleaning and validation with a friendly user interface which empowers non-programmers to conduct basic data analysis by simply writing a human-readable configuration file.

Type: Article
Title: Critical care data processing tools
Open access status: An open access version is available from UCL Discovery
DOI: 10.21105/joss.00513
Publisher version: https://doi.org/10.21105/joss.00513
Language: English
Additional information: This work is licensed under a Creative Commons Attribution 4.0 International License.
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences > Div of Medicine
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences > Div of Medicine > Experimental and Translational Medicine
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Population Health Sciences > Institute of Health Informatics
URI: https://discovery.ucl.ac.uk/id/eprint/10054382
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