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IsoplotR: A free and open toolbox for geochronology

Vermeesch, P; (2018) IsoplotR: A free and open toolbox for geochronology. Geoscience Frontiers , 9 (5) pp. 1479-1493. 10.1016/j.gsf.2018.04.001. Green open access

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Abstract

This paper reviews the basic principles of radiometric geochronology as implemented in a new software package called IsoplotR, which was designed to be free, flexible and future-proof. IsoplotR is free because it is written in non-proprietary languages (R, Javascript and HTML) and is released under the GPL license. The program is flexible because its graphical user interface (GUI) is separated from the command line functionality, and because its code is completely open for inspection and modification. To increase future-proofness, the software is built on free and platform-independent foundations that adhere to international standards, have existed for several decades, and continue to grow in popularity. IsoplotR currently includes functions for U-Pb, Pb-Pb, 40 Ar/ 39 Ar, Rb-Sr, Sm-Nd, Lu-Hf, Re-Os, U-Th-He, fission track and U-series disequilibrium dating. It implements isochron regression in two and three dimensions, visualises multi-aliquot datasets as cumulative age distributions, kernel density estimates and radial plots, and calculates weighted mean ages using a modified Chauvenet outlier detection criterion that accounts for the analytical uncertainties in heteroscedastic datasets. Overdispersion of geochronological data with respect to these analytical uncertainties can be attributed to either a proportional underestimation of the analytical uncertainties, or to an additive geological scatter term. IsoplotR keeps track of error correlations of the isotopic ratio measurements within aliquots of the same samples. It uses a statistical framework that will allow it to handle error correlations between aliquots in the future. Other ongoing developments include the implementation of alternative user interfaces and the integration of IsoplotR with other data reduction software.

Type: Article
Title: IsoplotR: A free and open toolbox for geochronology
Open access status: An open access version is available from UCL Discovery
DOI: 10.1016/j.gsf.2018.04.001
Publisher version: https://doi.org/10.1016/j.gsf.2018.04.001
Language: English
Additional information: Copyright © 2018 China University of Geosciences (Beijing) and Peking University. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/ licenses/by-nc-nd/4.0/).
Keywords: Geochronology, Software, Statistics
UCL classification: UCL
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences > Dept of Earth Sciences
URI: https://discovery.ucl.ac.uk/id/eprint/10050725
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