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Understanding enzyme function evolution from a computational perspective.

Tyzack, JD; Furnham, N; Sillitoe, I; Orengo, CM; Thornton, JM; (2017) Understanding enzyme function evolution from a computational perspective. Curr Opin Struct Biol , 47 pp. 131-139. 10.1016/j.sbi.2017.08.003. Green open access

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Abstract

In this review, we will explore recent computational approaches to understand enzyme evolution from the perspective of protein structure, dynamics and promiscuity. We will present quantitative methods to measure the size of evolutionary steps within a structural domain, allowing the correlation between change in substrate and domain structure to be assessed, and giving insights into the evolvability of different domains in terms of the number, types and sizes of evolutionary steps observed. These approaches will help to understand the evolution of new catalytic and non-catalytic functionality in response to environmental demands, showing potential to guide de novoenzyme design and directed evolution experiments.

Type: Article
Title: Understanding enzyme function evolution from a computational perspective.
Location: England
Open access status: An open access version is available from UCL Discovery
DOI: 10.1016/j.sbi.2017.08.003
Publisher version: https://doi.org/10.1016/j.sbi.2017.08.003
Language: English
Additional information: /ã 2017 Published by Elsevier Ltd. This is an open access article under the CC BY license (http://creativecommons.org/licenses/ by/4.0/).
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Div of Biosciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Div of Biosciences > Structural and Molecular Biology
URI: https://discovery.ucl.ac.uk/id/eprint/10025840
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