eprintid: 1452208
rev_number: 40
eprint_status: archive
userid: 608
dir: disk0/01/45/22/08
datestamp: 2014-12-05 16:35:35
lastmod: 2019-10-19 07:47:02
status_changed: 2014-12-05 16:35:35
type: thesis
metadata_visibility: show
item_issues_count: 0
creators_name: Soonthornsaratoon, T
title: Gradient-based methods for quantitative photoacoustic tomography
ispublished: unpub
divisions: A01
divisions: B04
divisions: C05
divisions: F42
keywords: quantitative photoacoustic tomography, gradient-based, chromophore concentrations, mathematical modelling, light transport, radiativer transfer equation, delta-Eddington, inverse problem
note: Third party copyright material has been removed from ethesis.
abstract: Photoacoustic tomography (PAT) is showing its potential as a non-invasive biomedical imaging modality, and interest in the field is growing rapidly. The images possess excellent contrast, high spatial resolution and good specificity, however, they are largely qualitative and not directly representative of the optically absorbing structures of interest. Quantitative PAT (QPAT) aims to determine quantitatively accurate spatial maps of the underlying tissue chromophores, in order to obtain highly-resolved images of functional information such as blood oxygen saturation and haemoglobin concentration. PAT images are inherently three-dimensional (3D), and their high resolution means that the data sets are of an extremely large scale; a typical problem can easily possess 10⁷ unknowns. Existing methods for QPAT have failed to address their applicability to real, 3D PAT images, either by making restrictive approximations to the light model or by using computational intensive techniques which are impractical for large-scale data sets. This thesis develops a practical inversion method for the full and general QPAT problem, in which the tissue geometry is arbitrary, the optical coefficients are unknown and the data is large-scale. The accuracy of the inversion method is ensured by use of the radiative transfer equation (RTE), which provides a highly accurate description of the propagation of light within biological tissue. Using the RTE, a thorough investigation into the effects of errors in the scattering coefficient on the reconstructed absorption coefficient is performed. Computational efficiency in the inversion is provided through an adjoint-assisted, gradient-based minimisation scheme, which iteratively adjusts the parameters of interest until the model prediction matches the measured data. Since the RTE proves too computationally intensive for large data sets, an extension to 3D simulated data is facilitated by the incorporation of the δ-Eddington approximation, thereby providing an accurate, efficient inversion method for QPAT that may be readily applied to experimental data.
date: 2014-10-28
vfaculties: VENG
oa_status: green
full_text_type: other
thesis_class: doctoral_open
language: eng
thesis_view: UCL_Thesis
primo: open
primo_central: open_green
verified: verified_manual
elements_source: Manually entered
elements_id: 986419
lyricists_name: Soonthornsaratoon, Teedah
lyricists_id: TSOON20
full_text_status: public
pages: 313
institution: UCL (University College London)
department: Medical Physics and Bioengineering
thesis_type: Doctoral
editors_name: Cox, BT
citation:        Soonthornsaratoon, T;      (2014)    Gradient-based methods for quantitative photoacoustic tomography.                   Doctoral thesis , UCL (University College London).     Green open access   
 
document_url: https://discovery.ucl.ac.uk/id/eprint/1452208/1/T%20Soonthornsaratoon_PhDThesis_FinalCopy_20-10-14.pdf.REDACTED.pdf