<> <http://www.w3.org/2000/01/rdf-schema#comment> "The repository administrator has not yet configured an RDF license."^^<http://www.w3.org/2001/XMLSchema#string> . <> <http://xmlns.com/foaf/0.1/primaryTopic> <https://discovery.ucl.ac.uk/id/eprint/10131896> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.org/ontology/bibo/AcademicArticle> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.org/ontology/bibo/Article> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/title> "Genome-scale metabolic network reconstruction of model animals as a platform for translational research"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/abstract> "Genome-scale metabolic models (GEMs) are used extensively for analysis of mechanisms underlying human diseases and metabolic malfunctions. However, the lack of comprehensive and high-quality GEMs for model organisms restricts translational utilization of omics data accumulating from the use of various disease models. Here we present a unified platform of GEMs that covers five major model animals, including Mouse1 (Mus musculus), Rat1 (Rattus norvegicus), Zebrafish1 (Danio rerio), Fruitfly1 (Drosophila melanogaster), and Worm1 (Caenorhabditis elegans). These GEMs represent the most comprehensive coverage of the metabolic network by considering both orthology-based pathways and species-specific reactions. All GEMs can be interactively queried via the accompanying web portal Metabolic Atlas. Specifically, through integrative analysis of Mouse1 with RNA-sequencing data from brain tissues of transgenic mice we identified a coordinated up-regulation of lysosomal GM2 ganglioside and peptide degradation pathways which appears to be a signature metabolic alteration in Alzheimer's disease (AD) mouse models with a phenotype of amyloid precursor protein overexpression. This metabolic shift was further validated with proteomics data from transgenic mice and cerebrospinal fluid samples from human patients. The elevated lysosomal enzymes thus hold potential to be used as a biomarker for early diagnosis of AD. Taken together, we foresee that this evolving open-source platform will serve as an important resource to facilitate the development of systems medicines and translational biomedical applications."^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/date> "2021-07-27" . <https://discovery.ucl.ac.uk/id/document/1347937> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.org/ontology/bibo/Document> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/volume> "118" . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/issue> "30" . <https://discovery.ucl.ac.uk/id/publication/ext-89c00482617a5e77b727abe6367244d0> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.org/ontology/bibo/Collection> . <https://discovery.ucl.ac.uk/id/publication/ext-89c00482617a5e77b727abe6367244d0> <http://xmlns.com/foaf/0.1/name> "Proceedings of the National Academy of Sciences"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/isPartOf> <https://discovery.ucl.ac.uk/id/publication/ext-89c00482617a5e77b727abe6367244d0> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/status> <http://purl.org/ontology/bibo/status/published> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-d64a0069006c74b46fb0cc9a48b3b861> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_1> <https://discovery.ucl.ac.uk/id/person/ext-d64a0069006c74b46fb0cc9a48b3b861> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-64c25d8762db947081c8faf57a5255ac> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_2> <https://discovery.ucl.ac.uk/id/person/ext-64c25d8762db947081c8faf57a5255ac> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-4a0c1568192a589b5a20685082bb5092> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_3> <https://discovery.ucl.ac.uk/id/person/ext-4a0c1568192a589b5a20685082bb5092> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-4f0fb3a58946ae2b4282095c73668571> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_4> <https://discovery.ucl.ac.uk/id/person/ext-4f0fb3a58946ae2b4282095c73668571> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-dc3adbeff99415a402742cfa68ac487b> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_5> <https://discovery.ucl.ac.uk/id/person/ext-dc3adbeff99415a402742cfa68ac487b> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-6772548a7d9b2a35461116b2b80d32de> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_6> <https://discovery.ucl.ac.uk/id/person/ext-6772548a7d9b2a35461116b2b80d32de> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-2bc82fa8fb67591dc25afc2d68270498> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_7> <https://discovery.ucl.ac.uk/id/person/ext-2bc82fa8fb67591dc25afc2d68270498> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-689d7c685d88ad2bf4358eb98716bcd3> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_8> <https://discovery.ucl.ac.uk/id/person/ext-689d7c685d88ad2bf4358eb98716bcd3> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-adfd9740e1f3b18a77cbab6674011c14> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_9> <https://discovery.ucl.ac.uk/id/person/ext-adfd9740e1f3b18a77cbab6674011c14> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-2b6968b9eed206992e7b8ea288bf377a> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_10> <https://discovery.ucl.ac.uk/id/person/ext-2b6968b9eed206992e7b8ea288bf377a> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-03524956f4bd271ac411cd4481c2da51> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_11> <https://discovery.ucl.ac.uk/id/person/ext-03524956f4bd271ac411cd4481c2da51> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-1b0b61e3239aeee01779acbbc5ff7b33> . <https://discovery.ucl.ac.uk/id/eprint/10131896> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> . <https://discovery.ucl.ac.uk/id/eprint/10131896#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_12> <https://discovery.ucl.ac.uk/id/person/ext-1b0b61e3239aeee01779acbbc5ff7b33> . <https://discovery.ucl.ac.uk/id/person/ext-d64a0069006c74b46fb0cc9a48b3b861> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-d64a0069006c74b46fb0cc9a48b3b861> <http://xmlns.com/foaf/0.1/givenName> "H"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-d64a0069006c74b46fb0cc9a48b3b861> <http://xmlns.com/foaf/0.1/familyName> "Wang"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-d64a0069006c74b46fb0cc9a48b3b861> <http://xmlns.com/foaf/0.1/name> "H Wang"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-4a0c1568192a589b5a20685082bb5092> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-4a0c1568192a589b5a20685082bb5092> <http://xmlns.com/foaf/0.1/givenName> "P"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-4a0c1568192a589b5a20685082bb5092> <http://xmlns.com/foaf/0.1/familyName> "Kocabas"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-4a0c1568192a589b5a20685082bb5092> <http://xmlns.com/foaf/0.1/name> "P Kocabas"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-dc3adbeff99415a402742cfa68ac487b> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-dc3adbeff99415a402742cfa68ac487b> <http://xmlns.com/foaf/0.1/givenName> "M"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-dc3adbeff99415a402742cfa68ac487b> <http://xmlns.com/foaf/0.1/familyName> "Anton"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-dc3adbeff99415a402742cfa68ac487b> <http://xmlns.com/foaf/0.1/name> "M Anton"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-64c25d8762db947081c8faf57a5255ac> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-64c25d8762db947081c8faf57a5255ac> <http://xmlns.com/foaf/0.1/givenName> "JL"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-64c25d8762db947081c8faf57a5255ac> <http://xmlns.com/foaf/0.1/familyName> "Robinson"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-64c25d8762db947081c8faf57a5255ac> <http://xmlns.com/foaf/0.1/name> "JL Robinson"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-6772548a7d9b2a35461116b2b80d32de> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-6772548a7d9b2a35461116b2b80d32de> <http://xmlns.com/foaf/0.1/givenName> "P-E"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-6772548a7d9b2a35461116b2b80d32de> <http://xmlns.com/foaf/0.1/familyName> "Cholley"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-6772548a7d9b2a35461116b2b80d32de> <http://xmlns.com/foaf/0.1/name> "P-E Cholley"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-2bc82fa8fb67591dc25afc2d68270498> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-2bc82fa8fb67591dc25afc2d68270498> <http://xmlns.com/foaf/0.1/givenName> "S"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-2bc82fa8fb67591dc25afc2d68270498> <http://xmlns.com/foaf/0.1/familyName> "Huang"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-2bc82fa8fb67591dc25afc2d68270498> <http://xmlns.com/foaf/0.1/name> "S Huang"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-4f0fb3a58946ae2b4282095c73668571> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-4f0fb3a58946ae2b4282095c73668571> <http://xmlns.com/foaf/0.1/givenName> "J"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-4f0fb3a58946ae2b4282095c73668571> <http://xmlns.com/foaf/0.1/familyName> "Gustafsson"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-4f0fb3a58946ae2b4282095c73668571> <http://xmlns.com/foaf/0.1/name> "J Gustafsson"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-adfd9740e1f3b18a77cbab6674011c14> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-adfd9740e1f3b18a77cbab6674011c14> <http://xmlns.com/foaf/0.1/givenName> "T"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-adfd9740e1f3b18a77cbab6674011c14> <http://xmlns.com/foaf/0.1/familyName> "Svensson"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-adfd9740e1f3b18a77cbab6674011c14> <http://xmlns.com/foaf/0.1/name> "T Svensson"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-2b6968b9eed206992e7b8ea288bf377a> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-2b6968b9eed206992e7b8ea288bf377a> <http://xmlns.com/foaf/0.1/givenName> "M"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-2b6968b9eed206992e7b8ea288bf377a> <http://xmlns.com/foaf/0.1/familyName> "Uhlen"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-2b6968b9eed206992e7b8ea288bf377a> <http://xmlns.com/foaf/0.1/name> "M Uhlen"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-03524956f4bd271ac411cd4481c2da51> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-03524956f4bd271ac411cd4481c2da51> <http://xmlns.com/foaf/0.1/givenName> "H"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-03524956f4bd271ac411cd4481c2da51> <http://xmlns.com/foaf/0.1/familyName> "Zetterberg"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-03524956f4bd271ac411cd4481c2da51> <http://xmlns.com/foaf/0.1/name> "H Zetterberg"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-1b0b61e3239aeee01779acbbc5ff7b33> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-1b0b61e3239aeee01779acbbc5ff7b33> <http://xmlns.com/foaf/0.1/givenName> "J"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-1b0b61e3239aeee01779acbbc5ff7b33> <http://xmlns.com/foaf/0.1/familyName> "Nielsen"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-1b0b61e3239aeee01779acbbc5ff7b33> <http://xmlns.com/foaf/0.1/name> "J Nielsen"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-689d7c685d88ad2bf4358eb98716bcd3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> 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