<> <http://www.w3.org/2000/01/rdf-schema#comment> "The repository administrator has not yet configured an RDF license."^^<http://www.w3.org/2001/XMLSchema#string> . <> <http://xmlns.com/foaf/0.1/primaryTopic> <https://discovery.ucl.ac.uk/id/eprint/10092773> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.org/ontology/bibo/AcademicArticle> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.org/ontology/bibo/Article> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/dc/terms/title> "Single Eye mRNA-Seq Reveals Normalisation of the Retinal Microglial Transcriptome Following Acute Inflammation"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/ontology/bibo/abstract> "Background: Whether retinal microglia can maintain or restore immune homeostasis during and after inflammation is unclear. We performed single-eye mRNA-sequencing on microglia at different timepoints following a single inflammatory stimulus to characterise their transcriptome during and after resolution of endotoxin-induced uveitis (EIU).\r\n/\r\nExperimental Approach: Cx3cr1CreER:R26-tdTomato (C57BL/6) male heterozygotes were administered tamoxifen via different regimes at 4–5 weeks of age. Four weeks post-tamoxifen, mice were injected intravitreally with 10 ng lipopolysaccharide (endotoxin induced uveitis, EIU). Six-hundred retinal microglia were obtained by FACS from individual naïve retinas and at 4 h, 18 h, and 2 weeks following EIU induction. Samples were sequenced to a depth of up to 16.7 million reads using the SMART-Seq v4 Ultra Low Input RNA kit. The data was analysed using Partek software and Ingenuity Pathway Analysis. Genes were considered differentially-expressed (DEG) if the FDR step-up p-value was ≤0.05 and the fold-change was ≥±2.\r\n/\r\nResults: Flow cytometric analysis indicates that the Cx3cr1CreER:R26-tdTomato strain is both sensitive (>95% tagging) and specific (>95% specificity) for microglia when tamoxifen is administered topically to the eye for 3 days. During “early†activation, 613 DEGs were identified. In contrast, 537 DEGs were observed during peak cellular infiltrate and none at 2 weeks, compared to baseline controls (1,069 total unique DEGs). Key marker changes were validated by qPCR, flow cytometry, and fluorescence microscopy. C5AR1 was identified and validated as a robust marker of differentiating microglial subsets during an LPS response.\r\n/\r\nConclusion: Using EIU to provide a single defined inflammatory stimulus, mRNA-Seq identified acute transcriptional changes in retinal microglia which returned to their original transcriptome after 2 weeks. Yolk-sac derived microglia are capable of restoring their homeostatic state after acute inflammation."^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/dc/terms/date> "2020-01-09" . <https://discovery.ucl.ac.uk/id/document/1062970> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.org/ontology/bibo/Document> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/ontology/bibo/volume> "10" . <https://discovery.ucl.ac.uk/id/org/ext-8b71f89f689c576aaf4c01416029f6c1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Organization> . <https://discovery.ucl.ac.uk/id/org/ext-8b71f89f689c576aaf4c01416029f6c1> <http://xmlns.com/foaf/0.1/name> "FRONTIERS MEDIA SA"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/dc/terms/publisher> <https://discovery.ucl.ac.uk/id/org/ext-8b71f89f689c576aaf4c01416029f6c1> . 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<https://discovery.ucl.ac.uk/id/eprint/10092773#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_3> <https://discovery.ucl.ac.uk/id/person/ext-a84c8090a2b71b09af98364def74068a> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-0a694cad8f068ac1cbc68f46c2352b7e> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10092773#authors> . <https://discovery.ucl.ac.uk/id/eprint/10092773#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_4> <https://discovery.ucl.ac.uk/id/person/ext-0a694cad8f068ac1cbc68f46c2352b7e> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-5c84cd5b52a7db37b80d3d1f8f963c17> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10092773#authors> . <https://discovery.ucl.ac.uk/id/eprint/10092773#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_5> <https://discovery.ucl.ac.uk/id/person/ext-5c84cd5b52a7db37b80d3d1f8f963c17> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-41f0f95b0e5b4c4655ee50a97f83e6ae> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10092773#authors> . <https://discovery.ucl.ac.uk/id/eprint/10092773#authors> <http://www.w3.org/1999/02/22-rdf-syntax-ns#_6> <https://discovery.ucl.ac.uk/id/person/ext-41f0f95b0e5b4c4655ee50a97f83e6ae> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/dc/terms/creator> <https://discovery.ucl.ac.uk/id/person/ext-6d4ae37219f624db00f2253201902596> . <https://discovery.ucl.ac.uk/id/eprint/10092773> <http://purl.org/ontology/bibo/authorList> <https://discovery.ucl.ac.uk/id/eprint/10092773#authors> . 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"Copland"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-893634d20f60025627efe2550169ea52> <http://xmlns.com/foaf/0.1/name> "DA Copland"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-84309d3c19de12495558162ee3733acc> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-84309d3c19de12495558162ee3733acc> <http://xmlns.com/foaf/0.1/givenName> "OH"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-84309d3c19de12495558162ee3733acc> <http://xmlns.com/foaf/0.1/familyName> "Bell"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-84309d3c19de12495558162ee3733acc> <http://xmlns.com/foaf/0.1/name> "OH Bell"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-5c84cd5b52a7db37b80d3d1f8f963c17> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-5c84cd5b52a7db37b80d3d1f8f963c17> <http://xmlns.com/foaf/0.1/givenName> "CAK"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-5c84cd5b52a7db37b80d3d1f8f963c17> <http://xmlns.com/foaf/0.1/familyName> "Lange"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-5c84cd5b52a7db37b80d3d1f8f963c17> <http://xmlns.com/foaf/0.1/name> "CAK Lange"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-41f0f95b0e5b4c4655ee50a97f83e6ae> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://xmlns.com/foaf/0.1/Person> . <https://discovery.ucl.ac.uk/id/person/ext-41f0f95b0e5b4c4655ee50a97f83e6ae> <http://xmlns.com/foaf/0.1/givenName> "CJ"^^<http://www.w3.org/2001/XMLSchema#string> . <https://discovery.ucl.ac.uk/id/person/ext-41f0f95b0e5b4c4655ee50a97f83e6ae> 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