Supplementary Table 1 Genotyping primers,,,,, ,,,,, ,,,,, ,Name,Sequence,Gene/Region,Position,Sense/Anti ,,,,, ,PCR PRIMERS,,,, ,RTA9,TAAATTTAGGAGTCTTTCCCCATA,pol - RT,3694-3719,ANTISENSE ,PS2,TCCCTCAAATCACTCTTTGGCAAC,pol - PR,2251-2276,SENSE ,,,,, ,SEQUENCING PRIMERS,,,, ,RTS1AD,CTGTACCAGTAAAATTAAAGCCAGG,pol - RT,2569-2593,SENSE ,PS2,TCCCTCAAATCACTCTTTGGCAAC,pol - PR,2251-2276,SENSE , RTA4,CTGTATATCATTGACAGTCCAGCT,pol - RT,3300-3323,ANTISENSE ,RTS2R,ATGGATTTTCAGGCCCAATTTTTGA,pol - PR,2691-2715,ANTISENSE