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Quadruplex DNA: sequence, topology and structure.

Burge, S; Parkinson, GN; Hazel, P; Todd, AK; Neidle, S; (2006) Quadruplex DNA: sequence, topology and structure. Nucleic Acids Res , 34 (19) 5402 - 5415. 10.1093/nar/gkl655. Green open access

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Abstract

G-quadruplexes are higher-order DNA and RNA structures formed from G-rich sequences that are built around tetrads of hydrogen-bonded guanine bases. Potential quadruplex sequences have been identified in G-rich eukaryotic telomeres, and more recently in non-telomeric genomic DNA, e.g. in nuclease-hypersensitive promoter regions. The natural role and biological validation of these structures is starting to be explored, and there is particular interest in them as targets for therapeutic intervention. This survey focuses on the folding and structural features on quadruplexes formed from telomeric and non-telomeric DNA sequences, and examines fundamental aspects of topology and the emerging relationships with sequence. Emphasis is placed on information from the high-resolution methods of X-ray crystallography and NMR, and their scope and current limitations are discussed. Such information, together with biological insights, will be important for the discovery of drugs targeting quadruplexes from particular genes.

Type: Article
Title: Quadruplex DNA: sequence, topology and structure.
Location: England
Open access status: An open access version is available from UCL Discovery
DOI: 10.1093/nar/gkl655
Publisher version: http://dx.doi.org/10.1093/nar/gkl655
Language: English
Additional information: PMCID: PMC1636468. © 2006 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
Keywords: Animals, Base Sequence, DNA, G-Quadruplexes, Guanine, Humans, Models, Molecular, Nucleic Acid Conformation, Telomere
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > UCL School of Pharmacy
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > UCL School of Pharmacy > Pharma and Bio Chemistry
URI: https://discovery.ucl.ac.uk/id/eprint/1335476
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