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XNA Synthesis and Reverse Transcription by Engineered Thermophilic Polymerases

Cozens, C; Pinheiro, VB; (2018) XNA Synthesis and Reverse Transcription by Engineered Thermophilic Polymerases. Current Protocols in Chemical Biology , 10 (3) , Article e47. 10.1002/cpch.47.

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Abstract

The B‐family polymerases of hyperthermophilic archaea have proven an exceptional platform for engineering polymerases with extended substrate spectra, despite multiple mechanisms for detecting and avoiding incorporation of non‐cognate substrates. These polymerases can efficiently synthesize and reverse‐transcribe a number of xenonucleic acids (XNAs) that differ significantly from the canonical B‐form of DNA. We present here a protocol for hexitol nucleic acid (HNA) synthesis by an engineered Thermococcus gorgonarius polymerase variant, including adaptation for large‐scale synthesis and purification, and for other XNAs. We describe XNA purification and reverse transcription (with a previously reported XNA RT also based on Thermococcus gorgonarius), as well as key considerations for the characterization and optimization of XNA reactions.

Type: Article
Title: XNA Synthesis and Reverse Transcription by Engineered Thermophilic Polymerases
Location: United States
DOI: 10.1002/cpch.47
Publisher version: https://doi.org/10.1002/cpch.47
Language: English
Additional information: This version is the author accepted manuscript. For information on re-use, please refer to the publisher’s terms and conditions.
Keywords: thermostable DNA polymerases, XNA synthesis, XNA reverse transcription
UCL classification: UCL
UCL > Provost and Vice Provost Offices
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Div of Biosciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Div of Biosciences > Structural and Molecular Biology
URI: https://discovery.ucl.ac.uk/id/eprint/10057351
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